Gene Information

Name : fliP-2 (PSTAA_2687)
Accession : YP_005939308.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2874994 - 2875770 bp
Length : 777 bp
Strand : -
Note : -

DNA sequence :
ATGTTGCGCATTCTGCTGCTGGCCACGCTGATGCTGGTCGGCCCTCTGGCCATGGCGCAGGAGCCTTCCGGCATCCTGGC
GCAGGGCAACAATCCGCTGTCGATCCCGGCGATCACCCTGACCACCGATGCCGAGGGGCAGCAGGAGTATTCGGTCAGTC
TGCAGATCCTGCTGATCATGACGGCGCTGAGCTTCATCCCGGCGTTCGTCATGCTGATGACCAGCTTCACCCGGATCATC
ATCGTCTTCTCGATCCTGCGTCAGGCGCTGGGGCTGCAACAGACGCCGTCGAACCAGATCCTCATCGGCCTGACGCTGTT
CCTCACCCTGTTCATCATGGCGCCGGTGTTCGACCGGATTAACCAGGACGCGCTGCAGCCCTATCTGAGCGAGCAGATTC
CGGCACAGGAGGCGATCGCCCGCGCCGAAGTACCGCTGAAGAACTTCATGCTGGCGCAGACCCGCGAGAGCGACCTGGAG
CTGTTCGTGCGGCTGTCGCAGCGCACCGACATCGCCTCGCCGGAAGCCGCACCGATGACCATCCTGGTCCCGGCGTTCGT
GACCTCCGAGCTGAAAACAGCGTTCCAGATCGGTTTCATGATCTTCATTCCGTTCCTGATCATCGACATGGTGGTGGCCA
GCGTGCTGATGGCGATGGGCATGATGATGCTGTCGCCGCTGATCATCTCGCTGCCGTTCAAGATCATGCTGTTCGTGCTG
GTGGACGGCTGGGGGCTGATCATCGGCACCCTGGCCGGCAGCTTCGGCACGCTTTAG

Protein sequence :
MLRILLLATLMLVGPLAMAQEPSGILAQGNNPLSIPAITLTTDAEGQQEYSVSLQILLIMTALSFIPAFVMLMTSFTRII
IVFSILRQALGLQQTPSNQILIGLTLFLTLFIMAPVFDRINQDALQPYLSEQIPAQEAIARAEVPLKNFMLAQTRESDLE
LFVRLSQRTDIASPEAAPMTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSPLIISLPFKIMLFVL
VDGWGLIIGTLAGSFGTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-27 43
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 2e-27 41
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 3e-27 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 3e-27 41
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 3e-25 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 3e-25 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 3e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP-2 YP_005939308.1 flagellar biosynthesis protein FliP VFG1259 Protein 3e-87 87
fliP-2 YP_005939308.1 flagellar biosynthesis protein FliP VFG2016 Protein 4e-63 61
fliP-2 YP_005939308.1 flagellar biosynthesis protein FliP VFG2494 Protein 6e-57 60
fliP-2 YP_005939308.1 flagellar biosynthesis protein FliP VFG2338 Protein 3e-54 58
fliP-2 YP_005939308.1 flagellar biosynthesis protein FliP VFG0519 Protein 1e-27 41
fliP-2 YP_005939308.1 flagellar biosynthesis protein FliP VFG0188 Protein 2e-28 41
fliP-2 YP_005939308.1 flagellar biosynthesis protein FliP VFG0394 Protein 2e-28 41