Gene Information

Name : PSTAA_2468 (PSTAA_2468)
Accession : YP_005939094.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Unknown
Product : ISPpu14, transposase Orf3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2653186 - 2654712 bp
Length : 1527 bp
Strand : +
Note : -

DNA sequence :
ATGACTTCCTTGCCCAATCTCGACCAACTAACACCTGAGCAACTGCGCGCACTGGCCGCCCAGTTGCTCACGCAGGTCGA
TGCGATGGGCAAAAAGATCCACCGTGATCAAACCATCATCGAGCAGCTCACCCACGAAATCGCCTGGTTCAAGCGCCACA
AGTTCGCCAAGCGTAGCGAGCAACTAAGCCCTGAACAGGGCAGCCTGCTGGATGATTTGCTCGACACGGACATCGCCGCC
ATCGAGGCGGAACTGAAAACCCTCAATCCTCCGGCGGCTCCGGCTGAACCCCGCCAACAGCCCAAGCGCGCGCCGCTGCC
AGCCCAGTTTCCGCGTACTGTGATCCGTCACGAGCCGCAGAACACTCAATGCGCCTGCGGCTGCCCGCTGCAACGCATCG
GCGAAGACATCAGCGAAAAGCTGGATTACACGCCTGGCGTGTTCACCGTCGAACAGCATGTGCGTGGCAAGTGGGCCTGC
CGCCAGTGCGAAACATTGATCCAGGCGCCGGTACCAGCCCAGGTGATCGACAAGGGCATCCCCACCGCCGGCCTTCTGGC
TCACGTGATGGTGGCCAAATTCGCCGACCACTTGCCGCTATATCGGCAAGAGAAAATCTTTGGCCGTGCCGGCCTGGCCA
TCGCTCGCTCGACACTGGCGCAGTGGGTCGGACAAACCGGCGTGCAGCTCCAGCCGCTAGTCGATGCCCTGCGCGAAGCC
GTGCTGGGCCAACGCGTGATCCACGCTGACGAAACCCCGGTGCAAATGCTCACCCCAGGCGAGAAGAAAACCCATCGGGC
TTACGTCTGGGCCTACAGCACCACACCCTTCGCCGATCTGAAGGCCGTGGTGTATGACTTCAGTCCCAGCCGTGCCGGCG
AGCATGCGCGCAATTTTCTTGGTCAGTGGAATGGCAAGCTGGTCTGCGACGACTTCGCTGGCTACAAGGCCAGCTTCGAG
CAAGGCATTACCGAAATCGGCTGCATGGCTCACGCCCGCCGCAAGTTCTTCGATCTGCACGCTGCAAACAAAAGCCAGTT
GGCCGAACAAGCACTGCACGCGATGGGCAGCCTGTACGAAATCGAACGGCAAGCACGGGACATGAGCGATGAAGAACGCT
GGCGAATACGACAGGAAAAGGCTTCACCGATCCTCGATACACTGCATGACTGGATACTGGCCCAGCGTGATCTTGTGCCC
AACGGATCGGCCACGGCGAAAGCCTTGGATTACAGCCTTAAACGCTGGCAGGCACTGACTCGCTATGTCGAGGATGGTGC
TGTGCCCATCGACAATAACCAGGTCGAGAACCAGATTCGTCCATGGGCCCTGGGGCGCTCGAACTGGTTGTTTGCCGGGT
CGCTACGCAGCGGCAAACGCGCGGCGGCGATCATGAGCCTGATCCAGTCGGCCCGCATGAACGGGCATGATCCGTATGCC
TATCTCAAGGACGTGCTGACACGCCTGCCGACGCAACGGGCGAGTGAGGTCGGCCAACTGCTGCCGCATCAGTGGGCGCC
TGCCTGA

Protein sequence :
MTSLPNLDQLTPEQLRALAAQLLTQVDAMGKKIHRDQTIIEQLTHEIAWFKRHKFAKRSEQLSPEQGSLLDDLLDTDIAA
IEAELKTLNPPAAPAEPRQQPKRAPLPAQFPRTVIRHEPQNTQCACGCPLQRIGEDISEKLDYTPGVFTVEQHVRGKWAC
RQCETLIQAPVPAQVIDKGIPTAGLLAHVMVAKFADHLPLYRQEKIFGRAGLAIARSTLAQWVGQTGVQLQPLVDALREA
VLGQRVIHADETPVQMLTPGEKKTHRAYVWAYSTTPFADLKAVVYDFSPSRAGEHARNFLGQWNGKLVCDDFAGYKASFE
QGITEIGCMAHARRKFFDLHAANKSQLAEQALHAMGSLYEIERQARDMSDEERWRIRQEKASPILDTLHDWILAQRDLVP
NGSATAKALDYSLKRWQALTRYVEDGAVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHDPYA
YLKDVLTRLPTQRASEVGQLLPHQWAPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 0.0 87
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 6e-133 53
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-65 42
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-70 42
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-66 41
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 6e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAA_2468 YP_005939094.1 ISPpu14, transposase Orf3 VFG1700 Protein 2e-65 42