Gene Information

Name : PSTAA_2431 (PSTAA_2431)
Accession : YP_005939057.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Virulence
Product : putative ATPase with chaperone activity, clpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2622153 - 2625002 bp
Length : 2850 bp
Strand : -
Note : -

DNA sequence :
ATGGCCAGAAAACAATGCCAGGTCTGTGGCCAACCCGCCACCGTGCGGGTGGAAGCCAATCTCAACGGTCGTCACAGCAC
CATGCTGTTGTGTGACGACCATTACCGCCAACTGGTGCGCCAGCAAAAGCGCACCGTCTCGCCGCTGGAAGCCTTGTTCG
GCTCGCGCAGCGGCCTGTTCGAGGACTTCCTCGGCAGTGATTTCTTCCGCATCGGCGACGACGCGACGCCCGTTGCCGCC
GATACCGATGACGTGGTCGATGCCTCGTTCGGCGAGCCCGCCGCCGCAGGTTCGGGTGCGCCGCGCCGTCGCGGCAGTGG
TTTGGCCAGCCGCATCAGCGAACAGTCGGAAGCCCTGCTGCAGGAGGCCGCCAAACACGCTGCCGAATTTGGCCGCTCCG
AGGTGGATACCGAACATCTGCTGCTGGCGCTGGCCGACAGCGACGTGGTCAAGACCATCCTGGGTCAGTTCAAGATCAAG
GTCGATGACCTCAAGCGGCAGATCGAGTCCGAGGCCAAGCGCGGAGACAAGCCATTCGAGGGCGAGATCGGCGTGTCGCC
CCGCGTGAAGGATGCGCTCAGCCGCGCCTTCGTGGCCTCCAATGAACTCGGCCATTCCTATGTCGGTCCGGAGCACTTCC
TGGTCGGTCTGGCCGAGGAAGGCGAAGGTCTGGCCGCCAACCTGCTGCGCCGCTACGGCCTGACGCCGCAGGCGCTGCGC
CAACAGGTCAGCAAGGTGGTCGGCAAGGGCGCCGAGGATGGTCGCGCCGAGACGCCGACCAACACGCCGGAACTCGACAA
GTACTCGCGTGACCTGACCAAGATGGCGCGCGACGGCAAGCTCGACCCGGTGATCGGCCGCGCGCAGGAGATCGAGACCA
CCATCGAGGTGCTGGCCCGGCGCAAGAAGAACAACCCGGTGCTGATCGGCGAGCCGGGCGTGGGCAAGACCGCCATCGTC
GAGGGGCTGGCGCAGCGCATGGTGGCGGGCGAAGTGCCCGAGACGTTGCGCGACAAGCGCCTGGTGGAACTCAACATCAA
CGCAATGGTGGCTGGCGCCAAGTACCGGGGCGAGTTCGAGGAGCGCGTGCAGAAGGTGCTCAAGGAAGTGACCGAGCACC
AGGGCGAGATGATTCTCTTCATCGATGAAGTGCACACCATCGTCGGTGCCGGCCAGGGTGGCGGCGAAGGCGGGCTGGAC
GTGGCCAACGTGTTCAAGCCGATGATGGCGCGCGGCGAACTGAACCTGATCGGCGCCACCACGCTCAACGAGTATCAGAA
GTACATCGAGAAGGACGCCGCGCTGGAGCGTCGCTTCCAGCCGGTGATGGTGCCCGAGCCGACGGTAGCGCAGACCATGA
TGATCCTGCGCGGCCTGCGCGACACCTTCGAGGCGCATCACAAGGTCAGCATCACCGAGGATGCGATCATCGCCGCCGCC
GAGTTGTCGGACCGCTACATCACCGCACGCTTTTTGCCTGACAAGGCCATCGACCTGCTCGACCAGGCGGCCGCACGCGT
GAAACTGTCGGCCACAGCCCGCCCGGTGGCGGTGCAAGAGCTGGAGTCCGAACTGCACCAGCTGCGGCGTGAGCAGGACT
ATATGGCCTCGCGCAAGCAGTACGACAAGGCCGCCGAGCTGGGCAAGCGCATCGAGACCAAGGAGACTGAACTCAAGAAG
CTCGTCGAGGAATGGGAACGCGAGCGCGCCTCGGGCAGCGCCGAAGTCAAGGCCGAGCATGTCGCGCAGATCGTCTCGCG
CCTGACCGGCATTCCGGTCAACGAGCTGACGGTGGAAGAACGCGAGAAGCTGCTGCATCTGGAGCAGCGGCTGCACGAGC
GCCTGGTGGGCCAGGACGAAGCGGTGCGCGCGGTGGCCGATGCCGTGCGGTTGTCGCGCGCGGGCCTGCGCGAGGGCAGC
AAGCCGGTGGCGACTTTTCTGTTCCTCGGGCCGACCGGCGTGGGCAAGACCGAGCTCGCTAAGGCGCTGGCCGAGTCCAT
CTATGGCGATGAAGGTGCGCTGCTGCGCATCGACATGTCCGAGTACGGGGAACGCCATACCGTGGCACGCCTGGTGGGCG
CGCCTCCGGGTTATGTGGGCTATGACGAGGGCGGCCAGCTCACCGAGAAGGTGCGTCGCAAGCCCTACAGCGTGTTGCTG
CTGGACGAGATCGAGAAGGCTCACCCCGACGTCTACAACATCCTGCTGCAGGTGTTCGACGACGGGCGGCTCACCGACGG
CAAGGGCCGGGTGGTGGATTTCACCAATACCATCATCATCGCCACCTCGAACTTGGGCTCGGACATCATCCAGCGTCGGC
TGAAGGCCCGTAGCGCCGCCGGCGAGGAATACGAGAAGACCAAGTCCGAGGTGATGGACGTGCTGCGCGGACACTTCCGC
CCCGAGTTCATCAACCGCATCGACGAGATCATCGTATTCCATGCGCTGGGCAAGGAGGAGATCCGCCATATCGTCGGCCT
GCAGCTCGATCGTGTGGCCCGCAACGCCGCCAGCCAGGGCGTGACGCTGACCTTCGATCAGACCTTGATCGATCACTTCG
CGGAGGAAGGCTACAAGCCCGAGTTCGGCGCGCGTGAGCTCAAGCGGCTGATCCGCAGCGAGCTGGAGACGGCACTGGCG
CGCGAGATGCTGGGTGGCGGTATCGGCAAGGGCGATCACGCCAGCGCCCGCTGGGATGACAAGGCCGAACGGGTGGTCTT
CGAGCGCCAGGAGCCACCCGCGAAGCCGGCCGAGCCAGAGCAGCCGGATGCCGCGAAGGCGGCCGAGGCGCCGCATGGCG
ACGCGGGTAAGGGCTCGCGCAAGAAGAAGTCGGCGAGCGACGCGTCTTAA

Protein sequence :
MARKQCQVCGQPATVRVEANLNGRHSTMLLCDDHYRQLVRQQKRTVSPLEALFGSRSGLFEDFLGSDFFRIGDDATPVAA
DTDDVVDASFGEPAAAGSGAPRRRGSGLASRISEQSEALLQEAAKHAAEFGRSEVDTEHLLLALADSDVVKTILGQFKIK
VDDLKRQIESEAKRGDKPFEGEIGVSPRVKDALSRAFVASNELGHSYVGPEHFLVGLAEEGEGLAANLLRRYGLTPQALR
QQVSKVVGKGAEDGRAETPTNTPELDKYSRDLTKMARDGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIV
EGLAQRMVAGEVPETLRDKRLVELNINAMVAGAKYRGEFEERVQKVLKEVTEHQGEMILFIDEVHTIVGAGQGGGEGGLD
VANVFKPMMARGELNLIGATTLNEYQKYIEKDAALERRFQPVMVPEPTVAQTMMILRGLRDTFEAHHKVSITEDAIIAAA
ELSDRYITARFLPDKAIDLLDQAAARVKLSATARPVAVQELESELHQLRREQDYMASRKQYDKAAELGKRIETKETELKK
LVEEWERERASGSAEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGS
KPVATFLFLGPTGVGKTELAKALAESIYGDEGALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLL
LDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKARSAAGEEYEKTKSEVMDVLRGHFR
PEFINRIDEIIVFHALGKEEIRHIVGLQLDRVARNAASQGVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSELETALA
REMLGGGIGKGDHASARWDDKAERVVFERQEPPAKPAEPEQPDAAKAAEAPHGDAGKGSRKKKSASDAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-163 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAA_2431 YP_005939057.1 putative ATPase with chaperone activity, clpB VFG0079 Protein 7e-173 50