Gene Information

Name : PSTAA_2288 (PSTAA_2288)
Accession : YP_005938918.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2458555 - 2460216 bp
Length : 1662 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGAAGTTTCGATTGGCGAGAACCTGGTCGAGGTCCGCGACCTGGCCGTCGAGTTCGTCACCGGCGATCAGGTCCA
GCGCGTGGTAGAGGGCGTGTCCTTCGACATCCGCAAGGGCGAAACCCTGGCGCTGGTGGGCGAAAGCGGCTCGGGCAAGT
CGGTCACCGCGCATTCCATCCTGCGCCTGCTGCCCTACCCGCTGGCCCGCCACCCCCAGGGGGAGATTCATTTCCACGGG
CAGGACCTGATCAAGGCGGACGAAAAAGCCATGCGCAAGATCCGTGGCAACCGTATCGCCATGGTCTTCCAGGAGCCCAT
GACCTCGCTCAACCCGCTGCACACGGTGGGCAAGCAGATCAACGAGGTTCTGGAAATCCACAAGGGCCTGCGCGGCAGGG
CCGCCAGTGCCCGCACGCTGGAATTGCTCGAGCTGGTGGGCATACCGGAGCCGCGCAAGCGCATCCGCGCCTACCCGCAC
GAACTGTCCGGCGGCCAGCGCCAGCGCGTGATGATCGCCATGGCCCTGGCCAACGAGCCGGAGCTGCTGATCGCCGATGA
ACCGACCACGGCGCTGGACGTTACCGTGCAGCTGAAGATCCTCGAACTGCTCAAGGAACTGCAGGCGCGGCTGGGCATGG
CGTTGCTGCTGATCAGCCACGACCTCAACCTGGTTCGGCGGGTCGCCCATCGCGTATGTGTCATGCAGCGCGGTCGTGTC
GTCGAACAGGCGTTGTGTGAAGAACTGTTCCGTTCGCCCAAGCATCCGTACACCCAGGAACTGCTCGCGGCCGAACCCAG
CGGCGGGCCGGTGGAGGTCGAGCAGGCGGCACCGCTGCTGGAGGTCGAGGATCTGCGCGTCTGGTTCCCGATCAAGAAGG
GCCTGCTGCGGCGTACCGTCGATCACATCAAGGCGGTCGACGGCGTGAACTTCAGCCTGCCCCGGGGGCAGACGCTGGGG
ATCGTCGGCGAAAGCGGCTCGGGCAAGTCGACCCTGGGGTTGGCTATCCTTCGTCTGTTGGCCAGTCGCGGCGAGATCCG
CTTCCAGGGTCAGCAACTGCAGGGCATGTCGCAGCGCGCCGTGCGGCCGTTGCGCCGGCAGATGCAGGTGGTCTTCCAGG
ACCCCTACGGCAGCCTGAGCCCGCGGATGTCGGTCGGACAGATCATCGGCGAAGGGCTGCGCATTCACCACATGGGTAAT
GCGCAGGAGCAGGAACAGGCAATCATTGACGCGCTCGTGGAGGTTGGTCTCGATCCGGAAACCCGGCATCGCTACCCCCA
CGAGTTTTCCGGCGGGCAACGGCAACGCATTGCCATTGCCCGGGCTCTGGTGTTGAAGCCGGCGCTGATACTGCTCGACG
AGCCGACCTCGGCGCTCGATCGCACGGTACAGCGTCAGGTGGTGGAGCTCCTGCGCTCGTTGCAGGCCAAGTACAACCTG
ACCTACCTGTTCATCAGCCATGACCTGGCGGTGGTCAGGGCGCTGAGCCACCAGATGATGGTGGTCAAGCAGGGCCAGGT
GGTGGAACAGGGGGCGGCTGCCGAGATATTCGCGGCACCGCAACATCCGTATACACAGCAGCTGCTGGAATCCGCCTTCA
TGGCGCCCGGCGCTGCCGAACAACCAGAAGAGGGACAAGCACATGGGTTTTCTCACCGGTAA

Protein sequence :
MSEVSIGENLVEVRDLAVEFVTGDQVQRVVEGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPQGEIHFHG
QDLIKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLEIHKGLRGRAASARTLELLELVGIPEPRKRIRAYPH
ELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRVAHRVCVMQRGRV
VEQALCEELFRSPKHPYTQELLAAEPSGGPVEVEQAAPLLEVEDLRVWFPIKKGLLRRTVDHIKAVDGVNFSLPRGQTLG
IVGESGSGKSTLGLAILRLLASRGEIRFQGQQLQGMSQRAVRPLRRQMQVVFQDPYGSLSPRMSVGQIIGEGLRIHHMGN
AQEQEQAIIDALVEVGLDPETRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNL
TYLFISHDLAVVRALSHQMMVVKQGQVVEQGAAAEIFAAPQHPYTQQLLESAFMAPGAAEQPEEGQAHGFSHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-81 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-81 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 7e-81 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-81 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-99 43