|
Name : PSTAA_2277 (PSTAA_2277) Accession : YP_005938907.1 Strain : Pseudomonas stutzeri DSM 4166 Genome accession: NC_017532 Putative virulence/resistance : Virulence Product : Orn/Arg/Lys decarboxylase Function : - COG functional category : - COG ID : - EC number : - Position : 2444166 - 2446418 bp Length : 2253 bp Strand : - Note : - DNA sequence : ATGTATAAAGACCTGAAATTCCCGATCCTCATCGTCCATCGCGACATCAAGGCCGACACCGTTGCCGGCGAACGCGTGCG AGGCATCGCCTCGGAGCTGGAGCGTGACGGTTTCAATATCCTGCCCACAGCGAGCTCCAGCGAGGGGCGCATCGTGGCGT CGACCCACCACGGGCTGGCCTGCATCCTGGTGGCCGCCGAAGGCGCCGGTGACAATCAGCGGCTGCTGCATGATGTCGTC GAACTGATTCGTGTCGCCAGACGCCGCGCGCCGCGTCTGCCGATCTTCGCACTGGGCGAGCAGGTGACGATCGAAAATGC GCCCGCCGAGGCCATGGCCGATCTCAACGAGCTGCGCGGGCTGCTTTACCTCTACGAGGACACCGTGCCGTTTCTGGCCC GGCAGGTCGCTCGGGCGGCGCGCAACTACCTCGAGGACCTGCTGCCGCCGTTCTTCCGAGCCCTGGTGCAGCACACAGGC GAGTCCAATTACTCCTGGCACACGCCGGGCCACGGTGGGGGGGTCGCCTATCGCAAGAGTCCGGTCGGCCAGGCGTTCCA TCAGTTCTTCGGCGAGAACACGCTGCGCTCGGATCTCTCCGTATCGGTGCCGGAGCTCGGTTCGCTGCTTGATCACACCG GGCCGGTGGCCGCCGCGGAAGCCCGTGCCGCGCGCAATTTCGGCGCGGATCATACCTTCTTCGTGATCAACGGCACCTCG ACGGCAAACAAGATCGTCTGGCATTCGATGGTGGCGCGTGGCGACCTGGTACTGGTCGATCGCAACTGTCACAAGTCGAT CCTCCACGCGATCATCATGACCGGTGCGATACCGCTGTACATGAGCCCCGCACGCAACGAACTGGGCATCATCGGACCCA TTCCGCTGGAGGAGTTCACCCGCGAGTCGATCCAGGCGAAGATCGCCGCCAACCCGCTGGCGCGCGGACGCCAGCCGAAG GTCAAGCTGGCGGTGGTCACGAATTCCACCTACGACGGCCTGTGCTACAACGCCAACCTGATCAAGCGCACCCTGGCCGA CAACGTCGAGGTGCTGCATTTCGACGAGGCCTGGTACGCCTACGCGGCCTTTCATGAGTTCTACGATGGCCGTTACGGCA TGGATACCCGTGAACAGGGGCCGCTGGTATTCACCACCCATTCCACGCACAAGCTGCTGGCCGCCTTCAGCCAGGCCTCG ATGATCCACGTACTCGACAGCCAGACCCGACAGCTGGACCGTGACCGCTTCAACGAAGCCTTCATGATGCACATCTCCAC CTCGCCGCAGTACGGCATCCTGGCGTCGCTCGATGTGGCCTCGGCAATGATGGAAGGGCCGGCGGGTCGCTCGCTGATCC AGGAGACCTTCGACGAGGCCCTGAGCTTCCGGCGGGCGCTGGCCAACCTGCGTCAGCACATCGATCCGGACGACTGGTGG TTCAGTATCTGGCAGCCGCCGCGGGTTGACGGCGCCGATGAGCTGGTGACGCGGGACTGGCTGCTGGAGCCCACCGCCGA CTGGCATGGTTTCGGCGATGTTGCCGACGACTATGTGCTGCTCGATCCGATCAAGGTCACGCTGGTGACGCCGGGCCTCA CCGCGTCCGGCGCGCTGGGCGAAAGTGGCATCCCGGCGGCGGTGGTCAGCAAGTTCCTCTGGGAGCGTGGCCTGGTGGTG GAGAAGACCGGTCTGTACTCGATGCTCGTGCTGTTCTCCATGGGCATCACCAAGGGCAAGTGGAGCACGCTGCTGACCGA GTTGCTGGAATTCAAACGCCATTACGACGCCAACATTCCGCTGATCGAAGCGCTGCCGTCGGTTGCCCGCAGCGGCGCTG CCACCTATGCCGGCATGGGGCTGCGCGACCTGTGCGATGCACTGCATGCCTGTTATTGCGAGAACGCAACGGCGCGGGCG ATGCGGCGGATGTACACGGCGCTGCCGGAGCCGGCCATGACCCCGGCGCAGGCCTATGATGCGCTGGTTCGCGGCGAGGT CGAGGCAGTTCCGATCGATGAGCTGGAAGGGCGGGTAGCAGCGGTGATGCTGGTGCCGTATCCGCCGGGCATCCCGCTGA TCATGCCGGGCGAGCGTTTCACCGGCGAGACTCGCTCGATTCTCGATTACCTTCGTTTCGCCCGGGACTTCGCCGAGCGC TTCCCGGGCTTCGATGCGGACGTCCATGGCTTGCAACACGAGGTCACCACCAACGGCAGCGCATACACCGTCGATTGCAT CCGCCAGGGGTGA Protein sequence : MYKDLKFPILIVHRDIKADTVAGERVRGIASELERDGFNILPTASSSEGRIVASTHHGLACILVAAEGAGDNQRLLHDVV ELIRVARRRAPRLPIFALGEQVTIENAPAEAMADLNELRGLLYLYEDTVPFLARQVARAARNYLEDLLPPFFRALVQHTG ESNYSWHTPGHGGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPVAAAEARAARNFGADHTFFVINGTS TANKIVWHSMVARGDLVLVDRNCHKSILHAIIMTGAIPLYMSPARNELGIIGPIPLEEFTRESIQAKIAANPLARGRQPK VKLAVVTNSTYDGLCYNANLIKRTLADNVEVLHFDEAWYAYAAFHEFYDGRYGMDTREQGPLVFTTHSTHKLLAAFSQAS MIHVLDSQTRQLDRDRFNEAFMMHISTSPQYGILASLDVASAMMEGPAGRSLIQETFDEALSFRRALANLRQHIDPDDWW FSIWQPPRVDGADELVTRDWLLEPTADWHGFGDVADDYVLLDPIKVTLVTPGLTASGALGESGIPAAVVSKFLWERGLVV EKTGLYSMLVLFSMGITKGKWSTLLTELLEFKRHYDANIPLIEALPSVARSGAATYAGMGLRDLCDALHACYCENATARA MRRMYTALPEPAMTPAQAYDALVRGEVEAVPIDELEGRVAAVMLVPYPPGIPLIMPGERFTGETRSILDYLRFARDFAER FPGFDADVHGLQHEVTTNGSAYTVDCIRQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 7e-127 | 42 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 6e-127 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSTAA_2277 | YP_005938907.1 | Orn/Arg/Lys decarboxylase | VFG1670 | Protein | 4e-127 | 42 |
