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Name : xcpS (PSTAA_0148) Accession : YP_005936811.1 Strain : Pseudomonas stutzeri DSM 4166 Genome accession: NC_017532 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 172977 - 174191 bp Length : 1215 bp Strand : + Note : - DNA sequence : ATGGCTGCCTTCGAATACCTCGCCCTCGACCCCCGTGGCCGTGAGCAGAAGGGCCTGATCGAGGCCGACAGCCCGCGTCA GGCGCGGCAGTTGCTGCGCGAGAAGCAGTGGGCGCCGCTGGAGGTGAAGCAGGCCAAGTCCAAGGAAGACGTCAGCCGTG GCGGCTTCAGTTTCGGCCGCGGCCTGTCGGCGCGTGATCTGGCATTGGTCACCCGGCAGCTGGCGACGCTGGTGCAGGCC GCGCTGCCCATCGAGGAAGCCCTGCGCGCGGCGGCCGCGCAGTCCACCTCGGCGAAGATCAAGTCGATGCTGCTGGCGGT GCGCGCGCGGGTGATGGAAGGCCACAGCCTGGCCGCGGCACTGCGCGAATATCCGTCGGCCTTTCCCGAGCTTTACCGCG CCACCGTGGCGGCCGGGGAGCACGCCGGCCATCTCGGGCTGGTGCTCGACCAGCTGGCCGACTACACCGACCAGCGTCAG CAATCGCGGCAGAAGATCCAGCTGGCGCTGCTTTATCCGGTGATCCTGATGGTCGCCTCGCTGGCCATCGTCGTGCTGCT GCTCGGCTACGTGGTGCCGGACGTGGTCAAGGTATTCGTCAACACGGGGCAGGAACTGCCGGCGCTGACCCGCGGGCTGA TCGCCACCAGCGACGTGGTGAAGAACTGGGGCTGGCTGATCGTGCTCGGCCTTGTCGGCGCGTTCCTGGCCATGCGTGCG GCCCTGCGCGACCCGGCGCTGCGCCTGCGCTGGCATGCGTTCATCCTGCGGATACCGCTGATCGGTCGGCTGAGCCGGGC GACCAATACCGCGCGCTTCGCCTCCACCCTGGCGATCCTGACGCGCAGCGGCGTGCCGCTGGTGGAAGCGCTGTCCATCG CCGCTGCGGTGATCGCCAACCTGCGCATCCGCGAGCGGGTGGTGGAGGCGGCGCAGAAGGTGCGCGAGGGCAGCAGCCTG ACCCGTGCGCTGGATGCCACCGGGGAATTCCCGCCGATGATGCTGCACATGATCGCCAGCGGGGAGAAATCCGGTGAACT GGATCAGATGCTGGCGCGAACCGCGCGCAATCAGGAGAACGACCTGGCCGCCCAGGTGTCTCTGCTGGTCGGCCTGTTCG AGCCGTTCATGCTGGTGTTCATGGGGGCGGTGGTGCTGGTCATCGTGCTGGCCATCCTGATGCCGATCCTCTCTCTCAAC CAACTGGTGGGTTAA Protein sequence : MAAFEYLALDPRGREQKGLIEADSPRQARQLLREKQWAPLEVKQAKSKEDVSRGGFSFGRGLSARDLALVTRQLATLVQA ALPIEEALRAAAAQSTSAKIKSMLLAVRARVMEGHSLAAALREYPSAFPELYRATVAAGEHAGHLGLVLDQLADYTDQRQ QSRQKIQLALLYPVILMVASLAIVVLLLGYVVPDVVKVFVNTGQELPALTRGLIATSDVVKNWGWLIVLGLVGAFLAMRA ALRDPALRLRWHAFILRIPLIGRLSRATNTARFASTLAILTRSGVPLVEALSIAAAVIANLRIRERVVEAAQKVREGSSL TRALDATGEFPPMMLHMIASGEKSGELDQMLARTARNQENDLAAQVSLLVGLFEPFMLVFMGAVVLVIVLAILMPILSLN QLVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-64 | 50 |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-64 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcpS | YP_005936811.1 | general secretion pathway protein F | VFG0181 | Protein | 7e-124 | 79 |
| xcpS | YP_005936811.1 | general secretion pathway protein F | VFG2049 | Protein | 3e-63 | 48 |
| xcpS | YP_005936811.1 | general secretion pathway protein F | VFG1870 | Protein | 7e-65 | 43 |
