Gene Information

Name : PSTAA_1259 (PSTAA_1259)
Accession : YP_005937911.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1347550 - 1349733 bp
Length : 2184 bp
Strand : -
Note : -

DNA sequence :
ATGTCGGGGAAACAGCCGGTCGAGGTTCTGCTGCGCCCAGCGGTGGAGTTCTATACCGTCGCGGCGTGTGCAGGCGCCGC
GTTTCTGTCCCTGGTGGCCCCGTGGTCGCTCGCGCTGAGCCCCGCCATGGGCGTCGGCAGTGCGCTGGCGTTCTGCATCT
ACGGTGCCATCCGCTACCGCGATGCCCGCGTCATCCTGCGCTACCGACGCAACATTCGCCGCTTGCCGCGCTATGTGATG
ACCAGCAAGGACGTGCCGGTCAGCCAGCAGCGTCTGTTCGTGGGACGCGGATTTCTGTGGGAGCAGAAACATACCCATCG
GCTGATGCAGACATACAGACCGGAATTTCGCCGCTACGTCGAGCTGACGCCGGCCTACCGGCTGGCGCGCAGGCTGGAGG
AACGGCTGGAGTTCGCGCCATTCCCGCTGTCCCGGCTACCTGCGCTCACGGGCTGGGATGTGCCTTTCAACCCGGTGCGC
CCGCTGCCGCCTGTGGGCGGCCTGCCGCGCCTGCACGGCATCGAACCCGATGAGGTGGACGTCAGCCTACCGCTGGGTGA
GCGCGTCGGGCATTCGCTGGTGCTGGGCACCACGCGCGTGGGCAAGACGCGGTTGGCCGAGTTGTTCGTGACTCAGGACA
TCCGGCGCAAGAACGCCGACGGCGAGCACGAGGTCGTCATCGTCATCGACCCCAAGGGCGACGCCGATCTTTTGAAGCGA
GTGTACGTCGAGGCCAAGCGCGCGGGGCGCGAGGGCGAGTTCTATGTCTTCCACTTGGGCTGGCCCGACATTTCCGCGCG
CTACAACGCTGTGGGCCGCTTTGGGCGCATCAGCGAGGTGGCCACCCGTGTTGCAGGGCAGCTCTCCGGGGAAGGCAACA
GCGCGGCATTTCGCGAGTTTGCGTGGCGCTTCGTCAACATCATCGCCCGCGCCCTGGTGGAACTGGGGCAGCGCCCGGAC
TACATGCTGATCCAGCGCCATGTGATCAACATCGACGCGCTGTTCATCGAGTACGCCCAACACTACTTCGCCAAGACCGA
GCCCAAGGCCTGGGAGGTCATCGTCCAGATCGAGGCCAAGCTCAACGAGAAGAACATCCCGCGCAACATGATCGGGCGCG
AAAAGCGCGTGGTGGCGCTGGAGCAGTACCTCTCGCAGGCGCGCAACTACGACCCGGTGCTCGACGGCCTGCGCTCGGCA
GTGCGCTACGACAAGACCTACTTCGACAAGATCGTCGCATCGCTGCTGCCGCTGCTGGAGAAGCTCACCAGCGGCAAGAT
CGCCCAGCTTCTGGCCCCGAACTACTCCGACCTGGCCGACCCACGCCCGATCTTCGATTGGATGCAGGTCATCCGAAAGC
GCGCCGTGGTCTATGTCGGCCTCGATGCGCTGTCCGACGCCGAGGTCGCCGCCGCAGTCGGCAATTCCATGTTCTCCGAC
CTGGTTTCGGTCGCCGGCCACATCTACAAGCACGGGATCGACGACGGCCTGCCGGGCGCATCGGCTGGCTCGCGCGTGCC
GATCAACGTCCATGCCGATGAGTTCAACGAGTTGATGGGCGACGAGTTCATCCCGCTGATCAACAAGGGCGGCGGCGCTG
GCCTGCAAGTCACCGCGTACACACAGACGCTCTCGGACATCGAAGCACGCATTGGCAACCGCGCGAAGGCCGGTCAGGTG
ATCGGCAACTTCAACAACCTGTTCATGCTGCGCGTGCGCGAGACGGCTACCGCTGAATTGCTGACCCGGCAATTGCCGAA
GGTCGAGGTCTATACGACCACCATCGTCAGCGGCGCGACCGACAGCTCCGATATTCGTGGAGCGACAGACTTTACGTCAA
ACACCCAGGACCGCATCAGCATGTCCAGCGTGCCGATGATCGAGCCATCGCACATCGTCGGCCTGCCCAAAGGCCAGTGC
TTCGCGCTGCTGCAGGGCGGTCAGCTTTGGAAGGTGCGTATGCCGTTGCCGGCGCCAGACCCGGATGAAGTGATGCCGGC
GGACTTGCAGCAACTGGCCGGGCACATGCGCCAGAGCTACAGCGAGGCCACGCAGTGGTGGGAGTTCACCAGCTCCCCGG
TCTTGCAGGACGCGGCCTTGCCGGACGATCTGCTCGATGAGACGGCCATCGCCACACCCATCACCGGCACGGGCGACACG
GCCAGCGAAGAGGCCGCGCCATGA

Protein sequence :
MSGKQPVEVLLRPAVEFYTVAACAGAAFLSLVAPWSLALSPAMGVGSALAFCIYGAIRYRDARVILRYRRNIRRLPRYVM
TSKDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYVELTPAYRLARRLEERLEFAPFPLSRLPALTGWDVPFNPVR
PLPPVGGLPRLHGIEPDEVDVSLPLGERVGHSLVLGTTRVGKTRLAELFVTQDIRRKNADGEHEVVIVIDPKGDADLLKR
VYVEAKRAGREGEFYVFHLGWPDISARYNAVGRFGRISEVATRVAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPD
YMLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAKLNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSA
VRYDKTYFDKIVASLLPLLEKLTSGKIAQLLAPNYSDLADPRPIFDWMQVIRKRAVVYVGLDALSDAEVAAAVGNSMFSD
LVSVAGHIYKHGIDDGLPGASAGSRVPINVHADEFNELMGDEFIPLINKGGGAGLQVTAYTQTLSDIEARIGNRAKAGQV
IGNFNNLFMLRVRETATAELLTRQLPKVEVYTTTIVSGATDSSDIRGATDFTSNTQDRISMSSVPMIEPSHIVGLPKGQC
FALLQGGQLWKVRMPLPAPDPDEVMPADLQQLAGHMRQSYSEATQWWEFTSSPVLQDAALPDDLLDETAIATPITGTGDT
ASEEAAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C65 AAN62159.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 95
ORF SG68 AAN62290.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 88
traG CAI36113.1 putative TraG family conjugative protein Not tested PPHGI-1 Protein 0.0 74
EXA47 ABD94656.1 TraG/TraD family protein Not tested ExoU island A Protein 0.0 70
unnamed ABR13375.1 hypothetical protein Not tested PAGI-5 Protein 0.0 70
RL047 AAP84173.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 70
STY4562 NP_458648.1 hypothetical protein Not tested SPI-7 Protein 0.0 63
t4260 NP_807858.1 hypothetical protein Not tested SPI-7 Protein 0.0 63
api27 CAF28501.1 hypothetical protein Not tested YAPI Protein 0.0 63
PMI2588 YP_002152307.1 plasmid transfer protein Not tested Not named Protein 0.0 63
YE3493 YP_001007651.1 TraG-family protein Not tested YAPI Protein 0.0 62
YpsIP31758_3718 YP_001402672.1 hypothetical protein Not tested YAPI Protein 0.0 62
Pmu_03190 YP_005176218.1 conjugal transfer protein TraD Not tested ICEPmu1 Protein 0.0 60
traD AAW83057.1 TraD Not tested GGI Protein 1e-123 49