Gene Information

Name : PSTAA_1238 (PSTAA_1238)
Accession : YP_005937890.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Unknown
Product : relaxase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1329234 - 1331090 bp
Length : 1857 bp
Strand : -
Note : -

DNA sequence :
ATGCTCTCTCTGTTCCAGCGGAAACGGCCTCCGGTCGCTGCCGCTCCGTCGCCTGCACCCGTCACCGATCTCCCGAAAGG
GCTGCTGCAACCGGAATCGGCCGCATCGCTGCTGGCGACACCGCGCCGGCAGAAGCTGCTGGAACACATCTGGCAGCGCA
CCTCGCTCTCGCGCAAGCAGTTCGCCGCGCTGTACCGCACGCCGATGGAACGTTATGCCGAGTTGGTTCAGACTTTCCCT
GCATCCGAAGCACATCACCATGCCTACCCAGGCGGCATGCTCGACCACGGCCTGGAAATCGTCGCCTACAGCCTGAAGCT
GCGCCAGTCTCATCTGCTGCCCATCGGCGCCAACCCCGAGGATCAGGCTGCGCAAGCCGAAGCCTGGACCGCTGCCGTCG
CCTACGCCGCACTGCTGCACGACATCGGCAAGATCGCCGTCGATCTGCACGTCGAGCTGGCCGACGGCTCGATCTGGCAT
CCGTGGCACGGCCCGCTGTGCCAGCCATACCGCTTCCGCTACCGAGACGATCGCGAGTACCGGCTCCACAGCGCCGCGAC
AGGCTTGCTCTACCGGCAACTGCTTGACCGTGAAGTCCTGGATTGGCTCAGCTGCTATCCGTCGCTGTGGGCACCGCTGC
TCTACGTCCTGGCCGGGCAGTACGAGCACGCTGGCGTGCTGGGCGAATTGGTGGTGCAGGCCGACCGAGCTTCCGTGGCC
CAGGAACTGGGCGGCGATCCCACACGCGCCATGGCCGCGCCCAAGCACGCACTGCAACGCAAGCTGCTCGACGGGCTGCG
TTACCTGCTCAAGGAGGAGCTGAAGCTGAACCAACACGAAGCCTCGGATGGCTGGCTCACCGAGGATGGTTTGTGGCTGG
TGAGCAAGACGGTCTCGGACAAGCTTCGGGCACATCTGCTGTCCCAAGGCATCGACGGCATCCCAGCGAACAACACCGCC
GTGTTCAACGTGCTGCAGGATCACGGCATGTTGCAGCCCACGCCGGACGGCAAAGCGATCTGGCGTGCGACCGTGACCAG
TTCCACCGGCTGGAGCCACTCGTTTACGTTGCTACGGCTGGCACCCGCGCTGATCTGGGAATCTGGTGAGCGACCGGCAC
CGTTCACCGGGACGTTGACGATCGACACGCCCACCGCAGTTGAAGATGTCGAAGCAGGAGCCACCCTTTCTGCGAACGGC
GCGACGTCCGCTTTGGAGAATCCAAACGCTCCGCCAGCGGAGGGTAGTGGCATCACCTCAGCCCCTCCACCCAAGGCCCA
GGCCAGCCCCGACGTCATAGCGGACATGCTGGCGATGGTGGGAACGGGAAACTCGCCAACCACAGATCAGGATGTGGAAA
CCGTCCCGGACGAAGTACCCGCAACTCTCCCCGATGCGACCCAGCCGCCCTTGGCCGCCGCTGCGCCTTCGTCACCGGCC
TTCACGTCCTCGACGACACAGCCATCCGGCGAGCACTTCATGGCGTGGCTGAAACATGGCATCGCCACGCGGCGGCTCAT
CATCAACGATGCGAAAGCGCTGGTGCATACCGTGAGCGACACCGCCTACCTGGTCAGCCCTGGCGTGTTCCAGCGCTATG
CGCAGGAACACCCGCAGGTAGGCAAACTGGCCAAACAGGAGAACCTGCAGGATTGGCAGTGGGTGCAGAAGCGCTTCGAG
CGACTGCAATTGCATCGCAAGCAACCAAGTGGCCTGAACATCTGGACTTGCGAAGTCACAGGCGCCAGAAAATCGAGGAA
GCTACATGGCTATTTACTTATCAAACCAGAAATGGTTTTCGAATTTACGCCTCCAAATAACCCATATCTATTTTCAATGA
AATTTCCCGGCCTATGA

Protein sequence :
MLSLFQRKRPPVAAAPSPAPVTDLPKGLLQPESAASLLATPRRQKLLEHIWQRTSLSRKQFAALYRTPMERYAELVQTFP
ASEAHHHAYPGGMLDHGLEIVAYSLKLRQSHLLPIGANPEDQAAQAEAWTAAVAYAALLHDIGKIAVDLHVELADGSIWH
PWHGPLCQPYRFRYRDDREYRLHSAATGLLYRQLLDREVLDWLSCYPSLWAPLLYVLAGQYEHAGVLGELVVQADRASVA
QELGGDPTRAMAAPKHALQRKLLDGLRYLLKEELKLNQHEASDGWLTEDGLWLVSKTVSDKLRAHLLSQGIDGIPANNTA
VFNVLQDHGMLQPTPDGKAIWRATVTSSTGWSHSFTLLRLAPALIWESGERPAPFTGTLTIDTPTAVEDVEAGATLSANG
ATSALENPNAPPAEGSGITSAPPPKAQASPDVIADMLAMVGTGNSPTTDQDVETVPDEVPATLPDATQPPLAAAAPSSPA
FTSSTTQPSGEHFMAWLKHGIATRRLIINDAKALVHTVSDTAYLVSPGVFQRYAQEHPQVGKLAKQENLQDWQWVQKRFE
RLQLHRKQPSGLNIWTCEVTGARKSRKLHGYLLIKPEMVFEFTPPNNPYLFSMKFPGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C36 AAN62129.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 78
ORF SG44 AAN62266.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 68
unnamed ABR13343.1 hypothetical protein Not tested PAGI-5 Protein 1e-137 52
RL003 AAP84130.1 pathogenesis-related protein Not tested PAPI-1 Protein 7e-139 52
EXA2 ABD94612.1 conserved hypothetical protein Not tested ExoU island A Protein 8e-139 52