Gene Information

Name : pilD (PSTAA_1018)
Accession : YP_005937670.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Virulence
Product : type 4 prepilin peptidase PilD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1106828 - 1107697 bp
Length : 870 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTTTGATTGACTTCTTGGCCAGCCATGTGCTGGCCTTTGTTTTGTCTGCTGCAGTGCTCGGTCTGCTGGTTGGCAG
CTTTCTCAATGTCGTAATTCACCGTTTGCCAATAATGATGCAGAGCGAATGGCGCATGCAGGCGCGGGAATATTTGGAGT
ATCCGCCCGAGCCAATTGGGGAGCGTTTCAATCTATTGGTGCCGAGTTCACGCTGCCCTCACTGCGGTCATCGTATCCGT
GCCTGGGAGAACATTCCCTTGGTCAGCTGGCTGGCGCTGCGTGGAAAGTGCTCGTCTTGTCAGACGCCGATCAGCTGTCG
ATATCCGTTGGTTGAGCTGGCGTGTGGTGTGCTATCCGGATACGTGGCATGGCATTTCGGTTTTTCCTGGCAGGCAGGGG
CGATGCTTCTGCTGACCTGGGGGTTGCTGGCGATGAGCATGATCGATGTCGATCATCAGTTGCTGCCTGACTCGCTCGTG
CTGCCGCTCTTGTGGGTAGGGTTGATTGCCAACAGCTTTGCTCTGTTCGCCTCTCTCGAGGATGCGCTGTGGGGGGCGAT
AGCCGGTTACCTGAGCCTATGGTCCGTTTATTGGCTGTTCAAGCTGATCACAGGCAAAGAGGGGATGGGCTACGGCGATT
TCAAGCTGCTGGCGATGCTTGGTGCCTGGGGTGGCTGGCAGGTTCTGCCGCTCACTATCTTGCTGTCGTCGGTGGTCGGC
GCCGTGCTTGGCAGTATTCTGCTGAGGGTGCAGCGGGCTGAAAGCAGTACGCCCATTCCGTTCGGGCCGTATCTGGCGAT
AGCGGGGTGGATTGCGTTGCTTTGGGGCGACCGAATTACCGAAAGCTACCTCCAGTTCGCTCGCTTCTGA

Protein sequence : 
MSLIDFLASHVLAFVLSAAVLGLLVGSFLNVVIHRLPIMMQSEWRMQAREYLEYPPEPIGERFNLLVPSSRCPHCGHRIR
AWENIPLVSWLALRGKCSSCQTPISCRYPLVELACGVLSGYVAWHFGFSWQAGAMLLLTWGLLAMSMIDVDHQLLPDSLV
LPLLWVGLIANSFALFASLEDALWGAIAGYLSLWSVYWLFKLITGKEGMGYGDFKLLAMLGAWGGWQVLPLTILLSSVVG
AVLGSILLRVQRAESSTPIPFGPYLAIAGWIALLWGDRITESYLQFARF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85237.1 putative prepilin peptidase A Not tested PAI V 536 Protein 2e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilD YP_005937670.1 type 4 prepilin peptidase PilD VFG0114 Protein 5e-88 78
pilD YP_005937670.1 type 4 prepilin peptidase PilD VFG0234 Protein 8e-47 53
pilD YP_005937670.1 type 4 prepilin peptidase PilD VFG2428 Protein 8e-40 52
pilD YP_005937670.1 type 4 prepilin peptidase PilD VFG1882 Protein 9e-53 51