Gene Information

Name : aldA (PAJ_0902)
Accession : YP_005933778.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase AldA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1067745 - 1069265 bp
Length : 1521 bp
Strand : +
Note : similar to Pantoea sp. At- 9b, aldehyde dehydrogenase (NCBI: ZP_05728467.1) COG: energy production and conversion subcellular localization as predicted by Psort 2.0: cytoplasmic

DNA sequence :
ATGCGCTATGCCGCTCCAGGAGAATCCGGTTCTCTCATCACGCTGCAAAAGCACTATGGCAATTTCATCAATGGGGAGTT
CGTTGCGCCGGTCAATGGCCAATACTTCACCAATACCTCGCCCGTTAATGGTTCAGATGCCGGGGCGTTTCCCCGCTCAG
ACAAGGCAGACGTCGATAACGCGGTCGCTGCCGCTGCCGCCGCGGCGGATGCCTGGGGAAAAACTTCGCCTCAGCAGCGC
GCCCTGGTGCTGCTTAAAATCGCCGATCGGCTGGAAGAGAAGCTGGAATACCTGGCGGTAAATGAAACCTGGGACAACGG
TAAACCGGTTCGTGAAACGCTGGCCGCCGATATGCCGCTGGCGGTGGATCACTTCCGCTATTTTGCCGGTTGTGTCAGGG
CGCAGGAGGGCAGCGCGGCGGAGATCGACGAATTTACTGCCGCCTATCACTTTCATGAACCCCTGGGCGTGGTGGCGCAG
ATCATCCCGTGGAACTTTCCGCTGCTGATGGCGGCATGGAAGCTGGCGCCGGCCCTGGGGGCAGGGAACTGCGTGGTGCT
CAAGCCCGCGGAGCAAACGCCGCTGTCGATTACCCTGTTTGTTGACCTGATTAAAGATCTGCTGCCGCCCGGCGTGGTCA
ACGTGGTCCACGGTTATGGTAAAGAAGCGGGTGAGGCGCTGGCCTCCCATCCGGGCATTTCCAAAGTGGCATTTACGGGA
TCGACGGCGACGGGCGGCCATATCCTGGAACTGGCGGCGAAAAGCTTGATTCCGTCTACGGTCGAACTGGGCGGGAAATC
GCCGAACATCTTTTTCGAAGATATCATGCAGGCCGAAGAAAGCTTTATTGAAAAAGCGGCGGAAGGGGTTGTGCTTGGCT
TCCTGAATCAGGGTGAAGTCTGTACCTGTCCGTCGCGGGCGCTCGTGCAGGAGTCCATTTACGAGCCCTTTATGGCGGCA
GTGCTTAAACGCATTAAAACCATCAAGCGCGGCGATCCCATGGATACGGAAACGATGGTGGGCGCGCAGGCTTCTCAGCA
GCAGTTCGATAAAATTCTTTCCTATCTGGAGATCGCCCGTCAGGAAGGGGCCGAGGTGCTGATCGGCGGCGGTGTTGAGA
CGCTCGATGACACGCTGGCCAGCGGCTACTACATTCAGCCGACGCTGCTGAAAGGCAACAACAGCATGCGGGTATTCCAG
GAAGAGATCTTTGGCCCGGTGGTGGGCATCACCACCTTCAAAGATGAGGCAGAGGCCATCGCCATTGCCAACGACTCCAT
CTACGGCCTGGGCGCGGGCGTCTGGACGCGGGATATCAACCGGGCCTACCGCGTCGGGCGGGCAATCAAAGCCGGACGTG
TCTGGACGAACTGCTATCACCTTTACCCCGCTCACGCGGCCTTCGGTGGCTATAAAAAATCAGGTATCGGTCGCGAGACG
CACAAGATGATGCTTGATCACTATCAGCAGACGAAAAATCTGCTGGTAAGCTACAGCATCCAGCCGCTTGGCTTCTTCTG
A

Protein sequence :
MRYAAPGESGSLITLQKHYGNFINGEFVAPVNGQYFTNTSPVNGSDAGAFPRSDKADVDNAVAAAAAAADAWGKTSPQQR
ALVLLKIADRLEEKLEYLAVNETWDNGKPVRETLAADMPLAVDHFRYFAGCVRAQEGSAAEIDEFTAAYHFHEPLGVVAQ
IIPWNFPLLMAAWKLAPALGAGNCVVLKPAEQTPLSITLFVDLIKDLLPPGVVNVVHGYGKEAGEALASHPGISKVAFTG
STATGGHILELAAKSLIPSTVELGGKSPNIFFEDIMQAEESFIEKAAEGVVLGFLNQGEVCTCPSRALVQESIYEPFMAA
VLKRIKTIKRGDPMDTETMVGAQASQQQFDKILSYLEIARQEGAEVLIGGGVETLDDTLASGYYIQPTLLKGNNSMRVFQ
EEIFGPVVGITTFKDEAEAIAIANDSIYGLGAGVWTRDINRAYRVGRAIKAGRVWTNCYHLYPAHAAFGGYKKSGIGRET
HKMMLDHYQQTKNLLVSYSIQPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-150 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-155 61
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-155 61
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-155 61
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-154 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldA YP_005933778.1 aldehyde dehydrogenase AldA VFG0082 Protein 1e-150 63