|
Name : ldcA (PAJ_0885) Accession : YP_005933761.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Unknown Product : muramoyltetrapeptide carboxypeptidase LdcA Function : - COG functional category : - COG ID : - EC number : - Position : 1050722 - 1051645 bp Length : 924 bp Strand : - Note : similar to Pantoea sp. At-9b, muramoyltetrapeptide carboxypeptidase (NCBI: ZP_05728442.1) COG: defense mechanisms subcellular localization as predicted by Psort 2.0: cytoplasmic DNA sequence : ATGACGTCACGTTCCATCCGTCTTATTGCCCCTTCAGGTTATTGCCATAATCAACCTGCGGCCCTGCTCGGGGTTGAACG CCTGCGAGCGGAAGGACATCGCGTGGACAATGACGCCGTCATCGCGCGGCGCTTCCAGCGCTTTGCTGGCACCGACGAGG CGCGCTCAGGCGATATTAATGAACTGGCTGACTTAGCAACCCTACCCGATATTGTGCTGGCGGTGCGCGGCGGTTATGGC GCAACACGGCTGCTGCCGTCGGTGGATTATGCCGGCCTGAAGCGTCGTTTAGCGCACCAGCCGCTGGCCATCTGTGGGCA CAGCGACTTCACCGTGTTGCAGTTAGCGCTGCTCCAACATGCCGGTTTGATTAGCTTCAGTGGACCGATGCTGGCGGGCA ATTTTGGCGCTGAGGTTTTATCCGAATTTACCCTGCAGCACTTTTGGCATGCGCTGACATCACCTACAGTCATGGTGGCC TGGCAAAGTGAAACACCCGATAACGGCCACTGGCAGGGGACGCTGTGGGGCGGCAACCTGGCGATGCTCTGCTCGCTAAT CGGGACGCCATGGCTGCCGCAGATTGAGAACGGCATTCTGGTTATCGAAGATGTTAACGAGCATCCGTTCCGTATTGAAC GTATGCTGCTGCAGTTGCACCAATGCGGCGTGCTGGCCAGACAGCAGGCAATTGTCACCGGCAGTTTCACCAGTACCGCT CTGTCGGAGTACGACAACGGATTTGATTTCCCTACGGTCTGGCAGCACATTCGCGAGGTCAGCGGTCTGCCGGTTATCAG CGACCTGGACTTCGGTCACGCTCCGGATACCGTCACCTTACCTCTGGGTGCAACGGCCACGCTGCAGGTGAATCAGGGTA AGGTTGTATTACAGGCGAGCGGACATCCCGTATTGCGCACATAG Protein sequence : MTSRSIRLIAPSGYCHNQPAALLGVERLRAEGHRVDNDAVIARRFQRFAGTDEARSGDINELADLATLPDIVLAVRGGYG ATRLLPSVDYAGLKRRLAHQPLAICGHSDFTVLQLALLQHAGLISFSGPMLAGNFGAEVLSEFTLQHFWHALTSPTVMVA WQSETPDNGHWQGTLWGGNLAMLCSLIGTPWLPQIENGILVIEDVNEHPFRIERMLLQLHQCGVLARQQAIVTGSFTSTA LSEYDNGFDFPTVWQHIREVSGLPVISDLDFGHAPDTVTLPLGATATLQVNQGKVVLQASGHPVLRT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| f304 | AAC61707.1 | F304 | Not tested | PAI I CFT073 | Protein | 3e-81 | 57 |
