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Name : kdsB (PAJ_0683) Accession : YP_005933559.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : - Position : 813374 - 814123 bp Length : 750 bp Strand : + Note : similar to Pantoea sp. At-9b, 3-deoxy-D-manno-octulosonate cytidylyltransferase (NCBI: ZP_05728893.1) COG: cell wall/membrane/envelope biogenesis subcellular localization as predicted by Psort 2.0: cytoplasmic DNA sequence : ATGAGTTTTATTGCCATCATTCCTGCTCGTTATGCCTCAACCCGTCTACCCGGTAAACCCTTGGTCGATATTCATGGCAA GCCGATGGTGGTACATGTGATGGAACGCGCGCGCGAATCCGGTGCCAGCCGGGTTATCGTGGCGACCGATCACCCGGATG TGGCCAGCGCAGTGGAAGCGTCGGGAGGCGAAGTCTGCATGACGCGCGCCGATCATCATTCAGGCACAGAACGCCTTGCC GAAGTGATTGAGAAGTATCAGTTCGCAGACGATCAAATTATCGTCAATGTTCAGGGCGATGAGCCTATGATCCCGGCCGA AATCGTGCACCAGGTGGCGAATAATCTGGCGCAGTCTGAGGCCGGTATGGCGACGCTGGCCGTGCCCATTACCGATGCAG AAGAAGCCTTTAATCCTAACGCCGTGAAAGTCGTTATGGATGCCAAAGGCTATGCGCTGTATTTTTCTCGTGCGACCATT CCCTGGGACCGCGAGCGCTATGCGGAATCACGCGATCGCATCGGCGATACGCTGCTCCGGCACATTGGCATTTACGCCTA CCGGGCAGGCTTTATTCGCCGTTACATCGACTGGGCACCTTGTCCCCTTGAGCAGATTGAATTACTCGAGCAGCTCCGGG TGCTGTGGTACGGCGAAAAGATTCACGTAGCGGTAGCAAAAACGGTGCCGGGCGTTGGGGTCGATACGCCAGAGGACCTG ATTCGTGTGCGCGCTGCCATGCGCGGCTGA Protein sequence : MSFIAIIPARYASTRLPGKPLVDIHGKPMVVHVMERARESGASRVIVATDHPDVASAVEASGGEVCMTRADHHSGTERLA EVIEKYQFADDQIIVNVQGDEPMIPAEIVHQVANNLAQSEAGMATLAVPITDAEEAFNPNAVKVVMDAKGYALYFSRATI PWDRERYAESRDRIGDTLLRHIGIYAYRAGFIRRYIDWAPCPLEQIELLEQLRVLWYGEKIHVAVAKTVPGVGVDTPEDL IRVRAAMRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 3e-36 | 46 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-36 | 46 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-37 | 46 |
