Gene Information

Name : serS (PAJ_0667)
Accession : YP_005933543.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase SerS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 791692 - 792942 bp
Length : 1251 bp
Strand : +
Note : similar to Pantoea sp. At- 9b, seryl-tRNA synthetase (NCBI: ZP_05728877.1) COG: translation, ribosomal structure and biogenesis subcellular localization as predicted by Psort 2.0: cytoplasmic

DNA sequence :
ATGCTCGATCCCAATCTGCTGCGTAATGAGCCAGACGCAGTCGCAGAAAAACTGGCACGCCGAGGATTCAAACTGGATGT
GGAAATGCTGCGTTCGCTCGAAGAGCGTCGCAAAGTCTTGCAGGTAGAAACTGAAAATCTGCAGGCCGAGCGTAACTCCC
GATCCAAATCCATCGGTCAGGCCAAAGCACGTGGGGAAGACATCGAGCCACTGCGTCAGGAAGTGAACAGCCTGGGCGAA
CGCCTGGATGCTGCCAAAGCAGAACTGGATGAACTGCAAAATCAGATTCGTGACTTCAGCCTGGCGCTGCCGAATCTGCC
TGCAGATGTTGTACCGCTGGGTAAAGACGATACCGAGAACCTGGAAATCAGCCGCTGGGGTGAGCCGCGTCAGTTTGATT
TTCAGGTGAAAGATCATGTTGAGCTGGGCGAAGCCGCGAAAGGCCTGGATTTTGCTGCGGCGGTCAAACTCACCGGTTCA
CGCTTTGTCGTGATGCAGGGCCAGATTGCCCGCCTGCACCGGGCGCTCAGCCAGTTTATGATTGACTTGCATACCGAGCA
GCATGGCTATCTGGAAACCTATGTGCCTTATCTGGTCAACCATGCGACCCTGTACGGAACAGGACAGTTGCCAAAGTTTG
GTGAAGATCTGTTTCACACCCGGCCGCTGGAAGAAGAGTCAGAAAGCAGCCACTATGCGTTGATTCCTACTGCCGAAGTG
CCGCTGACCAATCTGGTACGCGATGAAATCGTCGAGGAAGAAAACCTGCCGCTTAAGCTGACGGCTCACACGCCATGCTT
CCGCTCTGAAGCGGGTTCCTATGGCCGTGACACGCGCGGGCTTATCCGTATGCACCAGTTCGATAAAGTCGAGATGGTAC
AGATAGTGGCGCCTGAAACCTCAATGGATGCCCTGGAAGAGCTGGTCGGCCACGCCGAAAAAGTCTTACAGCTGCTGAAT
CTGCCTTATCGTAAAGTGCTGTTGTGCACCGGCGATATGGGCTTTGGTGCGACCAAAACCTACGATTTAGAAGTGTGGTT
ACCGGCGCAGAATACGTACCGTGAAATCTCCTCTTGTTCAAACATGGGTGATTTCCAGGCTCGCCGTATGCAGGCAAGGA
CCCGCGGTAAGCAGGATAAAAAGCCGCGTCTGGTCCATACATTAAATGGTTCCGGTCTGGCTGTGGGACGCACGCTGGTG
GCGGTGCTGGAAAACTACCAGCAGCAGGATGGCCTGCATCGCCGTGCCTGA

Protein sequence :
MLDPNLLRNEPDAVAEKLARRGFKLDVEMLRSLEERRKVLQVETENLQAERNSRSKSIGQAKARGEDIEPLRQEVNSLGE
RLDAAKAELDELQNQIRDFSLALPNLPADVVPLGKDDTENLEISRWGEPRQFDFQVKDHVELGEAAKGLDFAAAVKLTGS
RFVVMQGQIARLHRALSQFMIDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTRPLEEESESSHYALIPTAEV
PLTNLVRDEIVEEENLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVAPETSMDALEELVGHAEKVLQLLN
LPYRKVLLCTGDMGFGATKTYDLEVWLPAQNTYREISSCSNMGDFQARRMQARTRGKQDKKPRLVHTLNGSGLAVGRTLV
AVLENYQQQDGLHRRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 1e-100 54