Gene Information

Name : yliA (PAJ_0617)
Accession : YP_005933493.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 739592 - 741514 bp
Length : 1923 bp
Strand : +
Note : similar to Pantoea sp. At-9b, oligopeptide/dipeptide ABC transporter, ATPase subunit (NCBI: ZP_05728826.1) COG: amino acid transport and metabolism subcellular localization as predicted by Psort 2.0: inner membrane

DNA sequence :
ATGCCCGCACAGATGAGGCTGCAGAGGTGGCAATTTACCGTGAAAGCTAATCGTGAGGCCCTCCACAACAGCCTGTCTGG
CACAACAGTATTGACCGACGAGCAGGTGCTGGCCGTACGCGATCTCAACGTGCGTTTTGAAAACGATGGCGTAGTCACCC
AGGCTGTACGCCATCTTTCCCTTGACGTCTACCGGGGTAAAACCCTGGCCCTGGTGGGCGAATCTGGTTCGGGCAAGTCA
GTGACCTCGCTGGCGTTGATGCGCCTGATTGAGCAGGCCGGCGGAGACGTCAGCGGCGAGATCCTGTTGCGCGGTCGTAA
CGGCGAGGTACGGGATCTGATGCGCATGCCGCGCGGTCAGATGCGGCAGGTGCGCGGGGCCGATATGGCGATGATCTTCC
AGGAACCCATGACGTCGCTTAATCCGGTGTTCTCTGTTGGCGAGCAGATTGCCGAATCCATTCGTCTTCATCAGGGCCAA
TCCCACGCCGGGGCGCTGGCAGAAGCGCGTCGAATGCTCGACAGGGTACGTATTCCCGATGCGCAAAAGATCCTGCGCCG
CTTTCCCCACCAGCTCTCGGGCGGCATGCGTCAGCGCGTAATGATTGCCATGGCGCTGTCATGTCAACCTGCGCTGCTGA
TTGCAGATGAACCCACCACCGCGCTTGACGTGACGATTCAGGCGCAGATTCTGCAACTGATTCGCGAACTGCAAAAAGAG
ATGCGGATGGGGGTGATTTTTATCACTCACGATATGGGCGTGGTGGCTGAAATGGCTGACCGGGTACAGGTGATGTACCG
TGGCGAAGTGGTGGAAAATGCCGAAACGGCTCAGCTGTTCAGTGCGCCCCGCCAGGCTTACACGCGCGACCTACTGGCCG
CCGTACCGGCGCTGGGTGCCATGCGGGGCCAGCCGCTGCCCGCCAGGTTCCCGCTGATTGGCAGCGGCGACGAACCGGCA
GTACCACAGAATACCGTACGCCACGATCGGCCACCGATTTTACAGGTACGCAATCTGGTCACGCGGTTTGATATCCGCTC
AGGGTTATTTAACCGGGTGAAAAGTCGGGTACACGCGGTCGAGAATGTCAGTTTTGATCTCTACGCAGGTGAAACGCTGG
CGCTGGTAGGGGAGTCCGGATGCGGAAAATCCACCACCGGACGCTCCCTGCTAAAGCTGGTTGCCAGCCAGGGCGGCAGT
ATCACCTTTAACGGTCAGCGCATAAACGATCTCTCCGGTCCTGCCCTGGCCCATCTGCGGCGCGATATTCAGTTTATTTT
TCAGGATCCCTATGCGTCGCTGGATCCTCGCCTGACCGTCGGCTTCTCTGTTATGGAGCCACTGCTGGTCCACAAGGTGA
TGCCGCGCCATGAAGCAGAGCAGCGCGTCGCGTGGTTGCTGGAAAAGGTCGGGTTATTGCCGGAGCATGCAAGGCGCTAT
CCCCATGAGTTCTCCGGCGGCCAGCGGCAGCGTATTTGCATTGCGCGGGCGCTGGCGCTGAACCCGAAAGTGGTGATTGC
CGATGAGTCGGTTTCGGCGCTGGATGTGTCTATTCAGGCACAGATTATTAACCTGATGCTGGATTTACAGCGCGAGTTTG
GCATCGCATTTTTGTTTATTTCCCATGACATGGCGGTCGTTGAGCGCATCAGCCATCGTGTTGCGGTGATGTATCTTGGA
CAAATCGTCGAGATGGGGCCGCGTCAGGCGGTGTTTGAACGCCCGCAGCATCCTTACACCAAAAAGCTTATGGCCGCCGT
GCCTATTGCCGATCCGTCGCAGCGGCAGCGCGAGCGCAGTTTATTGGTCGATGAGATCCCCAGCCCAATTCGTTCACTGG
GCGACGAACCCGAAACGGTTTCGCTGATGGAAGTCGCGCCCGGCCATTTCGTGGCACGTCACGCTAACGCGCGACCTGAA
TAA

Protein sequence :
MPAQMRLQRWQFTVKANREALHNSLSGTTVLTDEQVLAVRDLNVRFENDGVVTQAVRHLSLDVYRGKTLALVGESGSGKS
VTSLALMRLIEQAGGDVSGEILLRGRNGEVRDLMRMPRGQMRQVRGADMAMIFQEPMTSLNPVFSVGEQIAESIRLHQGQ
SHAGALAEARRMLDRVRIPDAQKILRRFPHQLSGGMRQRVMIAMALSCQPALLIADEPTTALDVTIQAQILQLIRELQKE
MRMGVIFITHDMGVVAEMADRVQVMYRGEVVENAETAQLFSAPRQAYTRDLLAAVPALGAMRGQPLPARFPLIGSGDEPA
VPQNTVRHDRPPILQVRNLVTRFDIRSGLFNRVKSRVHAVENVSFDLYAGETLALVGESGCGKSTTGRSLLKLVASQGGS
ITFNGQRINDLSGPALAHLRRDIQFIFQDPYASLDPRLTVGFSVMEPLLVHKVMPRHEAEQRVAWLLEKVGLLPEHARRY
PHEFSGGQRQRICIARALALNPKVVIADESVSALDVSIQAQIINLMLDLQREFGIAFLFISHDMAVVERISHRVAVMYLG
QIVEMGPRQAVFERPQHPYTKKLMAAVPIADPSQRQRERSLLVDEIPSPIRSLGDEPETVSLMEVAPGHFVARHANARPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-104 41