Gene Information

Name : ybiF (PAJ_0605)
Accession : YP_005933481.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : inner membrane transport protein YbiF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 724693 - 725604 bp
Length : 912 bp
Strand : -
Note : similar to Pantoea sp. At-9b, protein of unknown function DUF6 transmembrane (NCBI: ZP_05728810.1) COG: amino acid transport and metabolism subcellular localization as predicted by Psort 2.0: inner membrane

DNA sequence :
ATGTCAGCCACCTCATTAAAGTCCATTACACCCGTTTTTATTCCCGTTATTGTTCTGCTTGTCTCAATGTTGTCACTTCA
GGGCGGTGCCTCGCTGGCGAAAACCCTGTTTCCCACCGTGGGCGCAACCGGCATTACTGCGCTACGTCTGGGATTTGGCA
CCCTGATCCTGTGCATTATTTTCAAACCCTGGCGACTGCGTTTTAGCCGGGAACAACGTACGCCACTGCTGATTTATGGT
TTGTCACTGGGCGCGATGAACTTCTTGTTCTACCTCTCCATCCGTACCGTGCCCTTAGGCATTGCGGTGGGCCTGGAGTT
TGTCGGTCCACTGACGCTGGCGCTGCTCGGTTCGCGCCGCGCGCTGGACTTTGTCTGGGTCCTGCTTGCCGTGGCAGGGC
TGTGGTTCCTGCTGCCGTTTAGCACCGGCATTGCCTCGGTGGATCCGATCGGCGCGCTGTTCGCGCTGGGTGCCGGCGCA
TGTTGGGCGATATATATCTTATCGGGCCAGCGCGCAGGGGCAGAACATGGTGCTGCGACCGTGGCCATCGGATCGCTTAT
TGCCTCGCTGGTTTTTGTTCCCGTGGGTCTGACGTTTGCCGCCAGTGGCATCTGGCAGTGGAGCGTGGTTCCCGTCGCGA
TTCTGGTGGCGTTTCTTTCTACAGCACTGCCCTACTCGCTGGAAATGGTGGCATTAACGCGCTTGCCGGCGCGCATCTTT
GGCACATTGATGAGCCTTGAGCCTGCAGTGGCAGCTCTGTCGGGGATGATGTATCTGCATGAAAGCCTGTCGGGTAAGCA
ATGTCTGGCGTTGCTGGCCATCATTCTGGCTTCCGCAGGCGCCACCCTGACGATGCGTCCAAGAAAGAGTCAGTTAAATG
AAGTTGAATTGACCGACAACGCAAAAAAATAA

Protein sequence :
MSATSLKSITPVFIPVIVLLVSMLSLQGGASLAKTLFPTVGATGITALRLGFGTLILCIIFKPWRLRFSREQRTPLLIYG
LSLGAMNFLFYLSIRTVPLGIAVGLEFVGPLTLALLGSRRALDFVWVLLAVAGLWFLLPFSTGIASVDPIGALFALGAGA
CWAIYILSGQRAGAEHGAATVAIGSLIASLVFVPVGLTFAASGIWQWSVVPVAILVAFLSTALPYSLEMVALTRLPARIF
GTLMSLEPAVAALSGMMYLHESLSGKQCLALLAIILASAGATLTMRPRKSQLNEVELTDNAKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0589 NP_938965.1 hypothetical protein Not tested Not named Protein 9e-29 41