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Name : PAJ_0411 (PAJ_0411) Accession : YP_005933287.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Virulence Product : outer membrane usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 515927 - 518452 bp Length : 2526 bp Strand : + Note : similar to Photorhabdus luminescens subsp. laumondii TTO1, outer membrane usher protein (NCBI:NP_927769.1) DNA sequence : ATGCTTAATATTATGAAAAAACAGAATTATAAAAATCGCTCGTTAAAATTATCAATTTGTCCGATCGCACTGGCCGTCTT ATCCGCATTTTTTTTGCCCGGTTATGTAATCGCAGCTGATGATGATATTGAATTTAACATAGACGTCCTGGATGTGAAGG AGCGCGGTGAAGTTGATATTGATCGTTTTTCACGCGTGGGTTATTTGATGCCGGGAAACTATGTTTTTAATGTGGTTGTA AATAAGTCTGAATATCCAGATGAAAAAATTAAATATATTTCTCCTAAAGACAATCCGGATGACTCTTTAGCATGTTTATC TCCCGAGCTGGTTAGCCGATTTGGTTTTAAAGAATATGAATTTAAAAAAGCGGGTTGGTGGAATAACGGTCAATGTCTTG ATGTGAATTCTTTTCCAGGAATGACAGTCAGACCCGATCTCGGTTCTGGTGTATTACAAATAAATATCCCTCAGGCTTTG ATGGAGTACACGTCTGAAAATTGGGATCCGCCTTCTCGCTGGGATGACGGCATACCGGGTTTTATTCTTGATTACTACCT AAATGCCAGGCATTCCCAGTCAAGAACCAATGCAGATTCGCAGACGTTAAGTGGTAATGGGGTTGCGGGGCTCAATATGG GTCCATGGCGCATGCGCGCAACCTGGCAAGGTGATTACGATCGTGAGTCTGGAGCAAACGGCAGCACAAAAAAAAACATT AAGTGGGATAGGTTCTATATTTTTCGCGCAATAAAATCGCTTAAATCCGAACTGATGCTGGGTGAGGCTTATTTGCCATC GACGCTGTTTGATTCGTTTCGTTTTACCGGTGCCAGCCTAACGTCTGATGATGCGCAACTGGCTCCAAACTTACGTGGTT ATGCACCTGAAGTGGTCGGCGTGGCAAAGACTAATGCCAAGGTAACTGTGAGCCAGCAGGGAAGCGTAATTTATGAAACC ACGGTAGCGTCTGGGCCTTTCCGCATTCAGGATCTGAACAACGCGGTGATGGGAAAACTGGATGTCACCATCCAGGAGCA GGACGGCACTAAACGTACGTTTCAGGTTGATACGGCAACGATACCCTATCTGACACGCCCTGGCAGCCTGCGCTATAAGT TGGCATTAGGTAAGCCGTCAGATTACGAGCACAATACGCAAAATATCAATTTTGCCACCGGTGAAGTTTCTTGGGGAATC TCAAACGGTTGGTCTGTTTATGGCGGTGGGCTTTTTTCGAGCGACTACCTGAGTATGGCTATCGGTATGGGACGAGATTT GCTGGCTTTCGGGGCAATCTCGCTGGACGTCACCACTGCAAAGGCGAAATTAAATGAAAGCGTTACCCGTAAAGGTAATT CTTATCGTTTAAGTTATTCCAAACGTTTTGATGATTACGATAGCCAAATTACCTTTGCGGGTTATCGCTTTTCTGATCGC AATTATATGACGATGTCACAGTTTTTAAGTGCTAAAACGGCGAGTTACAGTAATCCCGGTAACGGTAAAGAGCTATATAC CATCACGCTGGCAAAACAGCTGAGAAAGCTCAATGCAGGGATATACCTGAGTTATAACCACCAGACATACTGGGAGCGGT CGGCAAGTGATACGTGGAATCTTTCACTCTCTAGCAGCTTCGATATTGGTCGGTTTAAAAATGTCAGTGTGAGCCTTACC GGATACAGGACGCAATACGATAAAACGCAAGACGATGGTGTTTATCTGAGCTTGTCACTGCCGTTTGGCGAAGGGACATT GTCTTACAGTGGTCAAACCTCTCGTGGGACACAAAGCCAAAGCATAGGGTGGCGTGACAATCTCGGTGAGAGAGGCAGTT ACGATATTGATGTTGGTACATCAACGGATGGCGAACATTCAATTAGTGGTTATTACGATTATACCGGTAGCCTGGCAGAG ATTACGGCTTCAGCCGGATTAGAAAATAACGGATATCGTTCCTTGGGTCTGTCGCTTGAAGGGGGAATGACGGCAACAGC ACAGGGTGCAGCGCTGCACCGCTCATCTGGAGCAGACGGAACCCGTCTGATGGTCGATGCCGCTGGAATAGCGGGGGTTG CCATATCCGGTGGTGGTGAAAATGTGAAAACAAACTATTTTGGTAAAGCTGTTGTTACTGATGTAACCAGTTATTATCGC AGCAACATCAATATTGACCTTGATGAAATTCCAGATGATGTTGAAGCGACGCGTTCTGTAGTCGAAGATACGTTAACCAA AGGCGCAATTGGCTACCGAAAGTTTGGAATTTTAGCCGGGCAAAAAGGAATGGCGGTCGTAAAACTTAAGGATGGATCAG TACCGCCTTTTGGTGCCATGGTCAGAAATGAAGACAAAATCCAGACGGGTATTATCGCCGATGATGGAAAAGTCTGGCTA TCTGGAATGAAAACCGGTGGAAAAATGGATGTCAGTTGGAACGGCAGGGAGAAGTGTACCTTTACCTTGCCAGAAAGACT TGTTGAACATACCGGGAATTTATTACTCCCATGTATTGAGAAGTAA Protein sequence : MLNIMKKQNYKNRSLKLSICPIALAVLSAFFLPGYVIAADDDIEFNIDVLDVKERGEVDIDRFSRVGYLMPGNYVFNVVV NKSEYPDEKIKYISPKDNPDDSLACLSPELVSRFGFKEYEFKKAGWWNNGQCLDVNSFPGMTVRPDLGSGVLQINIPQAL MEYTSENWDPPSRWDDGIPGFILDYYLNARHSQSRTNADSQTLSGNGVAGLNMGPWRMRATWQGDYDRESGANGSTKKNI KWDRFYIFRAIKSLKSELMLGEAYLPSTLFDSFRFTGASLTSDDAQLAPNLRGYAPEVVGVAKTNAKVTVSQQGSVIYET TVASGPFRIQDLNNAVMGKLDVTIQEQDGTKRTFQVDTATIPYLTRPGSLRYKLALGKPSDYEHNTQNINFATGEVSWGI SNGWSVYGGGLFSSDYLSMAIGMGRDLLAFGAISLDVTTAKAKLNESVTRKGNSYRLSYSKRFDDYDSQITFAGYRFSDR NYMTMSQFLSAKTASYSNPGNGKELYTITLAKQLRKLNAGIYLSYNHQTYWERSASDTWNLSLSSSFDIGRFKNVSVSLT GYRTQYDKTQDDGVYLSLSLPFGEGTLSYSGQTSRGTQSQSIGWRDNLGERGSYDIDVGTSTDGEHSISGYYDYTGSLAE ITASAGLENNGYRSLGLSLEGGMTATAQGAALHRSSGADGTRLMVDAAGIAGVAISGGGENVKTNYFGKAVVTDVTSYYR SNINIDLDEIPDDVEATRSVVEDTLTKGAIGYRKFGILAGQKGMAVVKLKDGSVPPFGAMVRNEDKIQTGIIADDGKVWL SGMKTGGKMDVSWNGREKCTFTLPERLVEHTGNLLLPCIEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 2e-176 | 46 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 1e-167 | 45 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 9e-168 | 45 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 1e-168 | 45 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 9e-169 | 45 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 6e-169 | 45 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 1e-168 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PAJ_0411 | YP_005933287.1 | outer membrane usher protein | VFG0884 | Protein | 5e-169 | 45 |
| PAJ_0411 | YP_005933287.1 | outer membrane usher protein | VFG0895 | Protein | 4e-169 | 45 |
| PAJ_0411 | YP_005933287.1 | outer membrane usher protein | VFG1548 | Protein | 6e-169 | 45 |
