Gene Information

Name : yfdH (PAJ_0386)
Accession : YP_005933262.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Virulence
Product : bactoprenol glucosyl transferase from prophage CPS-53 YfdH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 460522 - 461433 bp
Length : 912 bp
Strand : -
Note : similar to Citrobacter koseri ATCC BAA- 895, hypothetical protein CKO_01844 (NCBI: YP_001453407.1) COG: general function prediction only subcellular localization as predicted by Psort 2.0: inner membrane

DNA sequence :
ATGAAAATATCGCTGATTGTTCCTGTTCTTAATGAAGAAGACGCTATTCCCGTGTTTTATAAAACGGTGCGTGAATTTGA
GGCGTTGAAACAGCACACCATTGAAATCGTTTTTATAAATGACGGCAGTAAAGATGCAACAGAATCTATTATCGATGCGC
TTTCGGTTTCAGATCCTCTGGTCGTGCCGCTGTCCCTTACCCGCAACTTTGGTAAAGAACCTGCTCTTTTCGCGGGATTA
GAGCATGCTACGGGTGATGCTGTTATCCCTATTGATGTTGATTTACAAGATCCCATTAACGTCATTCCTTTACTGATTGA
AAAATGGCAGGCAGGTGCGGATATTGTTCTGGCTAAGCGCATCGACAGGTCTACTGATGGGCACCTGAAAAGGAAGACGG
CGGAATGGTTTTACACCTTACATAATAAAATCAGTAACCCGAAAATTGAAGAAAATGTAGGTGACTTTCGCCTGATGTCA
CGGGACGTGGTTGAGAATATTAAGAAGATGCCAGAGCGGAACCTCTTCATGAAAGGGATTCTTTCATGGGTTGGCGGCAA
GACGGAGGTAATTGAGTATGCCAGAGCCGAGCGTGTCGCTGGCGATTCAAAGTTTAATAGCTGGAAGCTGTGGAACCTGG
CTCTTGAAGGCATAACCAGTTTCTCAACCTTTCCGCTACGTATGTGGACGTATATTGGCCTGCTCGTGGCGAGCTTCGCG
TTTTTGTATGGCGCATGGATGATCGTGGATAAAATCTGGTTTGGCAACAGTGTTCCCGGTTACCCTTCGCTTTTAGTATC
AATACTCTTTCTTGGTGGCGTTCAGCTCATTGGTATCGGTGTATTGGGCGAGTATATCGGAAGAATATACATAGAGAGTA
AGAACCGACCACGTTACATCATTAAAAAGTGA

Protein sequence :
MKISLIVPVLNEEDAIPVFYKTVREFEALKQHTIEIVFINDGSKDATESIIDALSVSDPLVVPLSLTRNFGKEPALFAGL
EHATGDAVIPIDVDLQDPINVIPLLIEKWQAGADIVLAKRIDRSTDGHLKRKTAEWFYTLHNKISNPKIEENVGDFRLMS
RDVVENIKKMPERNLFMKGILSWVGGKTEVIEYARAERVAGDSKFNSWKLWNLALEGITSFSTFPLRMWTYIGLLVASFA
FLYGAWMIVDKIWFGNSVPGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYIESKNRPRYIIKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 1e-113 85
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 8e-115 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfdH YP_005933262.1 bactoprenol glucosyl transferase from prophage CPS-53 YfdH VFG0670 Protein 3e-114 87