Gene Information

Name : rbkS (PAJ_3767)
Accession : YP_005936642.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : ribokinase RbkS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4523571 - 4524488 bp
Length : 918 bp
Strand : +
Note : similar to Yersinia frederiksenii ATCC 33641, deoxyribokinase (NCBI: ZP_04634138.1) COG: carbohydrate transport and metabolism subcellular localization as predicted by Psort 2.0: cytoplasmic

DNA sequence :
ATGGATATCGCCGTTATTGGTTCAAACATGGTGGATTTAATCACCTATACCAACAGCTTTCCTAAAGCTGGAGAGACGCT
TGAGGCACCCGATTTTGCGATTGGCTGTGGGGGAAAAGGGGCCAATCAGGCTGTGGCGGCAGCAAAACTGGGTGGCGAGG
TGATGCTGGTCAGTAAAGTCGGCGATGACCTGTTTGCGCCCACCACGTTGGCTAATTTGCAACAGCAGGGCGTGGATACG
CGTTATGTCACAACCGAAAAAGGGGTTTCCAGCGGCGTGGCCCCCATTTTTGTTGATGATCAGTCGCAAAACCGCATTTT
AATTATCAAAGGCGCGAATCAGCACCTCAAGCCGGCGGATATTGATGCTGCGGGTGATGCGTTGAAACGCTGTCGGTTGA
TCATTCTTCAGCTCGAAATTCCGCTGGAAACGGTGTACTACGCTATCGATTTTGCCCGTCAGCATGATATTCGCGTCATC
CTCAACCCTGCGCCCGCCGTGGCAGACCTGGATATCCGCTATGCCTGCCAGTGCGACTTTTTTATGCCCAATGAGACGGA
GCTGGAAATTCTTACCGGGATGCCGGTGGGGACGGATGATGACGTCAGGCTGGCCGGTGCATCCTTGCTGAAACGTGGCC
TGAAAAACCTGATCGTTACGCTGGGCAGTCGCGGATCGTTGTGGATGACCGGAGAGACACAGCACCAGGTTGCGCCTGTG
CCGGTTAAGGCAGTGGATACCAGCGGTGCGGGTGATGCGTTTATCGGCTGCTTCGCTCATGAACTGGTGAAAACGGGCGA
TATTCCTGCGGCGATGGCCAAAGCCTCCGCCTACGCGGCCTGTAGCGTGACGGCGCGCGGCACACAACGTTCTTATCCTG
ATACAGCGGAATTTCAGCGCTTTCTTGACCTTCAGTGA

Protein sequence :
MDIAVIGSNMVDLITYTNSFPKAGETLEAPDFAIGCGGKGANQAVAAAKLGGEVMLVSKVGDDLFAPTTLANLQQQGVDT
RYVTTEKGVSSGVAPIFVDDQSQNRILIIKGANQHLKPADIDAAGDALKRCRLIILQLEIPLETVYYAIDFARQHDIRVI
LNPAPAVADLDIRYACQCDFFMPNETELEILTGMPVGTDDDVRLAGASLLKRGLKNLIVTLGSRGSLWMTGETQHQVAPV
PVKAVDTSGAGDAFIGCFAHELVKTGDIPAAMAKASAYAACSVTARGTQRSYPDTAEFQRFLDLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoK ADD91722.1 deoxyribokinase DeoK Not tested PAI-I AL862 Protein 5e-88 63
unnamed CAE85173.1 hypothetical protein Not tested PAI V 536 Protein 6e-88 63
ORF4 AAK27331.1 unknown Not tested PAI-I AL862 Protein 2e-81 60