|
Name : yjdC (PAJ_3542) Accession : YP_005936417.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Unknown Product : putative HTH-type transcriptional regulator YjdC Function : - COG functional category : - COG ID : - EC number : - Position : 4251221 - 4251706 bp Length : 486 bp Strand : - Note : similar to Pantoea sp. At-9b, putative transcriptional regulator, TetR family (NCBI: ZP_05730834.1) COG: transcription subcellular localization as predicted by Psort 2.0: unknown DNA sequence : ATGCAGCTCAGCCTGACACAGCTTGAACAGTTTTGGCCCGATCGTGACGCGCTGCTCTACGATGCACTGCAGTTTCACGC CCAGCAGATTGAACAGTGGCGTCATGACATTCTGCAGAACGACGCTCTGCGTCCTGATCAGAAGCTGATGGCACGCTATG AAGGATTAAACGAGCAGGTCAACAAGGGCCGCTTTCCCGGTTGCCTGTTTATCGCCGCCTGCAGTTTTTATCCCCAGCCC GATCAGCCCATCCATCAGTTGGCAGAAAAGCAGAAGCGCGCCTCATGGCAATTTACGCATACCATCTTAACCTCGCTTGG TCTGGATAATCCCAGTATGGTTGCCGATCAAATGGAACTGATACTGGAAGGCTGCCTGAGCAAACTGCTGGTTAAACGCA ACGTGCAGGACGTTGATGTGGCGAAACGCCTGGCGGAAGACGTATTGAGTATCGCCCTCTGCCGTAAAAACGGCGCACTG GCCTGA Protein sequence : MQLSLTQLEQFWPDRDALLYDALQFHAQQIEQWRHDILQNDALRPDQKLMARYEGLNEQVNKGRFPGCLFIAACSFYPQP DQPIHQLAEKQKRASWQFTHTILTSLGLDNPSMVADQMELILEGCLSKLLVKRNVQDVDVAKRLAEDVLSIALCRKNGAL A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0341 | CAF28570.1 | putative transcription regulator | Not tested | YAPI | Protein | 3e-51 | 60 |
