Gene Information

Name : sgbU (PAJ_3514)
Accession : YP_005936389.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : putative hexulose-6-phosphate isomerase SgbU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4216649 - 4217509 bp
Length : 861 bp
Strand : -
Note : similar to Pantoea sp. At-9b, hexulose-6-phosphate isomerase (NCBI: ZP_05728083.1) COG: carbohydrate transport and metabolism subcellular localization as predicted by Psort 2.0: unknown

DNA sequence :
ATGAAACGCCAGCATCCGTTAGGTATTTACGAGAAAGCCCTGCCCGCTAACCTCACCTGGCCTGAACGACTGGCGCTGGC
AAAAGCCTGTGGCTTTGATTTTGTGGAAATGTCGGTAGACGAAACCGACGTGCGGCTGGAGCGCCTGACCTGGAGCAAAG
AGCAGCGCCTGTCGCTGGTCAACGCCATGATTGAAACCGGCGTGACCATTCCCTCCATGTGCCTGTCGGCGCATCGCCGC
TTTCCGTTTGGCAGTCACGATCCGGCGATCCGCCAGCGGGCAGACGATCTGATCGATCGCGCCATCCAACTGGCAAAGGA
CGTGGGGATCCGCACGATTCAGCTTGCCGGTTACGACGTCTATTACGAACCCCACGATGATGGCACCGTGGCGCGCTTTG
CCGAAGGCTTGTCACGTGCGGTGCAACGCGCCGCCGCGGCGCAGGTGATGCTGGCGGTTGAGATCATGGATACCGAGTTT
ATGAACGCTATCAGCAAGTGGAAAGTCTGGGAGCAGCAGCAGGCTTCTCCATGGTTTTCCGTTTATCCGGACGTGGGCAA
TCTCAGCGCCTGGGGCAATGATGTCACCGCCGAACTGACCCTGGGTATTGATCGCATCGCCGCGATTCATTTGAAGGATA
CCCAACCCGTGACCGCAAGCTCGCCGGGCCAGTTTCGGGACGTCCCCTTTGGTCAGGGCTGCGTGGACTTTGTCGGCGTA
TTCCGCACGCTTAAGGCGCTGAACTATCGCGGATCGTTCCTGATTGAAATGTGGACGGAAAAAGCCGAGGAGCCGGTTGC
AGAGATCGTGCAGGCCCGGCGCTGGATTGAACAGAAAATGCAGGAAGGAGGTTTAGTATGA

Protein sequence :
MKRQHPLGIYEKALPANLTWPERLALAKACGFDFVEMSVDETDVRLERLTWSKEQRLSLVNAMIETGVTIPSMCLSAHRR
FPFGSHDPAIRQRADDLIDRAIQLAKDVGIRTIQLAGYDVYYEPHDDGTVARFAEGLSRAVQRAAAAQVMLAVEIMDTEF
MNAISKWKVWEQQQASPWFSVYPDVGNLSAWGNDVTAELTLGIDRIAAIHLKDTQPVTASSPGQFRDVPFGQGCVDFVGV
FRTLKALNYRGSFLIEMWTEKAEEPVAEIVQARRWIEQKMQEGGLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 1e-64 55