Gene Information

Name : iucB (PAJ_3505)
Accession : YP_005936380.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Virulence
Product : aerobactin siderophore biosynthesis protein IucB IucB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4205904 - 4206851 bp
Length : 948 bp
Strand : +
Note : similar to Pectobacterium wasabiae WPP163, siderophore biosynthesis protein, conserved region (NCBI: YP_003258373.1) COG: inorganic ion transport and metabolism subcellular localization as predicted by Psort 2.0: unknown

DNA sequence : 
ATGTCTCAGGCAACGATTGTTCACAGCGGCCACGGCCTGCGTTGCGAAAAGTCAGGAAAAACCCTGAATCTGGGTTGGGG
ACAGGACAACAGTGCGGTGCTGCATTTTGCCGGTCCACTGCCCGAAGGCTGGCTGCGTGACGCGCTGGATCAGATGTTTA
TCGCTGCCCCGCAGCTTTCTGCCGTGGTGCTGCCCTTCGCAGAGTGGCGTGAAGAGCCTCAGGCGCTGGCGCTGTTTGCG
GCCCTGAAAAGCGATATCGTCCACCGCGAGACGTTCTGGCAACTGCCGCTGTGGTTGTCTGCGCCTCGTCAGCAGGCCTC
CGGCGAGATGGTATTTGATGCCGAACGTGAGATCTATTTTCCCCAGCGCCCAGCGCGACCTGATGGCGAAGTGTATCGCC
GTTACGACCCGCGCGTACGGCGAACGCTGAGCTTCCGCGTGGCCGATCCTGCCCGCGATGCCGAAGCGTTTACCCGCTGG
ATGAACGATCCGCGCGTGGATTACTTCTGGGAGCAGAGCGGATCGCTGGCCACTCAGACCGCCTATCTTGAACGCCAGCT
CGGCAGCAGCTATGCCTTTCCGCTGATTGGCTGTTTTGATGACGAGCCCTTCAGCTACTTTGAAATTTACTGGGCGGCGG
AAGATCGTATCGGGCGGCACTACAGCTGGCAGCCGTACGATCGCGGTTTGCATCTGCTGGTGGGTGAGCCGCAGTGGCGC
GGGCCGCACTTTGTGCAGAGCTGGCTGCGCGGCATCAGCCACTATCTGCTGCTGGATAATCCGCAAACCCAGCGCCTGGT
GCTGGAACCGCGGGCGGATAATCAGCGCCTGTTTCGTCACCTTGAACCCGCGGGCTATACCAGCGTGAAAGAGTTCGACT
TTCCGCACAAGCGCTCTCGCCTGGTGATGACCCAGCGCGCCCGTTTCTTCAGCGAGGTGGGCCTGTGA

Protein sequence : 
MSQATIVHSGHGLRCEKSGKTLNLGWGQDNSAVLHFAGPLPEGWLRDALDQMFIAAPQLSAVVLPFAEWREEPQALALFA
ALKSDIVHRETFWQLPLWLSAPRQQASGEMVFDAEREIYFPQRPARPDGEVYRRYDPRVRRTLSFRVADPARDAEAFTRW
MNDPRVDYFWEQSGSLATQTAYLERQLGSSYAFPLIGCFDDEPFSYFEIYWAAEDRIGRHYSWQPYDRGLHLLVGEPQWR
GPHFVQSWLRGISHYLLLDNPQTQRLVLEPRADNQRLFRHLEPAGYTSVKEFDFPHKRSRLVMTQRARFFSEVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucB YP_002414045.1 aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase Virulence Not named Protein 3e-124 80
iucB NP_839222.1 siderophore biosynthesis protein Virulence SHI-2 Protein 6e-125 80
iucB NP_709455.1 siderophore biosynthesis protein Virulence SHI-2 Protein 6e-125 80
iucB AAD44747.1 IucB Virulence SHI-2 Protein 5e-125 80
iucB AAK71632.1 IucB Virulence SHI-3 Protein 4e-125 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iucB YP_005936380.1 aerobactin siderophore biosynthesis protein IucB IucB VFG1082 Protein 2e-125 80
iucB YP_005936380.1 aerobactin siderophore biosynthesis protein IucB IucB VFG0939 Protein 1e-124 80
iucB YP_005936380.1 aerobactin siderophore biosynthesis protein IucB IucB VFG0616 Protein 2e-125 80