Gene Information

Name : qseB (PAJ_3469)
Accession : YP_005936344.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4159797 - 4160456 bp
Length : 660 bp
Strand : -
Note : similar to Pantoea sp. At-9b, two component transcriptional regulator, winged helix family (NCBI: ZP_05732326.1) COG: signal transduction mechanisms subcellular localization as predicted by Psort 2.0: cytoplasmic

DNA sequence : 
ATGCGCGTTTTGTTGGTCGAAGATGATGAAATGATCGGCGCGAATTTGCAGCAGGCGCTGGAAGCGGCAGGCTGGTCAGT
TGACTGGGTACGCGATGGCGTGTATGCGCAAAACGCCTGGAGCGAAGGCGGCTACAGCTGCGTCCTGCTTGATCTTGGCT
TACCCCGGGACGATGGATTGCAGGTGCTGAGACGGGCACGCGGGCGCGGGGATGCCACACCGGTCTTGATCCTTACCGCC
CGCGATACGGTCGCTCAGCGCGTACAGGGCCTGGATTATGGTGCGGATGACTACCTGCTTAAGCCTTTTGATCTTCAGGA
GGTCATGGCCCGCATGCGTGCGATTACCCGGCGCCATCACGGTTCCGCCGATTCGGTGCTGGGCAGCGGGGATGTTCAAC
TGGATATGCTGACGCGCGAAGTCCTGTACAAAGGGCAACGTGAGCAGTTAACCGCCCGGGAATATGCCCTGCTCTATGCG
CTGCTGGAGCGGCCCGGTGCCATCCTGTCACGCGAGCAGTTAGAGAACCGCATCTATGGCTGGGGCGAAGAAGTCAGCAG
CAATGCGGTAGACGTATTAATCCACGGCATGCGGCGCAAGCTGGATAATGATGTGATCCGCAACGTGCGCGGACTGGGTT
GGCGAGTACCGGCAATATGA

Protein sequence : 
MRVLLVEDDEMIGANLQQALEAAGWSVDWVRDGVYAQNAWSEGGYSCVLLDLGLPRDDGLQVLRRARGRGDATPVLILTA
RDTVAQRVQGLDYGADDYLLKPFDLQEVMARMRAITRRHHGSADSVLGSGDVQLDMLTREVLYKGQREQLTAREYALLYA
LLERPGAILSREQLENRIYGWGEEVSSNAVDVLIHGMRRKLDNDVIRNVRGLGWRVPAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_005936344.1 transcriptional regulatory protein QseB BAC0197 Protein 1e-22 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_005936344.1 transcriptional regulatory protein QseB VFG0473 Protein 2e-26 45
qseB YP_005936344.1 transcriptional regulatory protein QseB VFG1390 Protein 5e-21 42