Gene Information

Name : rpmE3 (PAJ_0346)
Accession : YP_005933222.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L31 type B RpmE3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 413591 - 413854 bp
Length : 264 bp
Strand : -
Note : similar to Pantoea sp. At-9b, ribosomal protein L31 (NCBI: ZP_05727511.1) COG: translation, ribosomal structure and biogenesis subcellular localization as predicted by Psort 2.0: unknown

DNA sequence :
GTGAGAATCATGAAAGCGAATATTCATCCTACCTATCGTGCAGTGGTGTTCCACGACACTTCTGCTGACGTGTATTTCAA
AATCGGTTCCACCATCAAAACCGATCGTACCGTTGAGTTTGAAGGCGAAACCCTGCCTTACGTTACGCTCGACGTCTCGT
CGGCATCTCATGTGTTTTATACCGGTAAGCAGAAAGACTTTGCTAAAGAAGGCAGCACTGCCCGCTTTAACCAGCGCTTT
GGCCGCTTTCTGGGTCGCCGATAA

Protein sequence :
MRIMKANIHPTYRAVVFHDTSADVYFKIGSTIKTDRTVEFEGETLPYVTLDVSSASHVFYTGKQKDFAKEGSTARFNQRF
GRFLGRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rpmE2 NP_286687.1 50S ribosomal protein L31 Not tested TAI Protein 4e-23 68
rpmE2 NP_287095.1 50S ribosomal protein L31 Not tested TAI Protein 4e-23 68