Gene Information

Name : hemC (PAJ_3322)
Accession : YP_005936198.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase HemC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3971710 - 3972663 bp
Length : 954 bp
Strand : -
Note : similar to Geobacter uraniireducens Rf4, porphobilinogen deaminase (NCBI: YP_001229148.1) COG: coenzyme transport and metabolism subcellular localization as predicted by Psort 2.0: unknown

DNA sequence : 
ATGGTTAACGGCATGTTAAACAAAATTTTCAGAATTGCTACACGACAAAGCCCACTTGCCCTGTGGCAAGCACAATATGT
ACAGCAACGATTGATCAGTGCCCATCCTGGCCTGCGCGTGGAGCTGGTACCTATGGTGACAAAGGGCGATATCATTCTTG
ATACACCGCTCGCGAAAGTGGGGGGGAAAGGGCTGTTCGTTAAAGAGCTCGAGCAGGCAATGTTAGAAAACCGTGCCGAT
CTGGCCGTACATTCGATGAAAGATGTGCCCGTGGCATTTCCGGAAGGCCTGGGCCTGGTCACCATTTGCCAGCGGGACGA
TCCGCGCGATGCGTTTGTCTCCAATCACTACGCGTCAATTGATGAACTTCCACAGGGCGCTGTCATTGGAACGTCAAGCC
TGCGGCGTCAGTGCCAGATTAGCGCGCGACGTCCCGATCTGGTGATTCGCTCGCTGCGCGGGAACGTGGGCACACGATTA
AGTAAGCTTGATGCTGGCGAATATGACGCCATTATTCTTGCCGCCGCCGGGTTGAATCGACTTGGCCTGGCCGATCGTAT
TCGCCAACCGCTACCTGCGGATATTTCCTTACCCGCCGTGGGTCAGGGCGCAGTTGGCATCGAATGTCGGTTAGACGACA
GCACGTTAATTGCGCTGTTACAGGCATTGAATCACGATGATACGGCGGTCTGTGTGAGAGCGGAACGCGCCATGAATACC
CGACTTGAAGGCGGCTGCCAGGTTCCGATTGGTAGCTTTGCCGTACTTGAAGGCGACGAACTCTGGCTTCGCGGTCTGGT
GGGTGCACCCGATGGGAGCGTCATGGTGAGCGGTGAACGCCGTGGGCCTCGCGATCAGGCAGAGCAAATGGGCATTTCGC
TGGCAGACGAGTTGCTCAACGGTGGCGCACGTGAAATTCTGCGCGACGTTTATCAGGGGCAACCTCCCGTATGA

Protein sequence : 
MVNGMLNKIFRIATRQSPLALWQAQYVQQRLISAHPGLRVELVPMVTKGDIILDTPLAKVGGKGLFVKELEQAMLENRAD
LAVHSMKDVPVAFPEGLGLVTICQRDDPRDAFVSNHYASIDELPQGAVIGTSSLRRQCQISARRPDLVIRSLRGNVGTRL
SKLDAGEYDAIILAAAGLNRLGLADRIRQPLPADISLPAVGQGAVGIECRLDDSTLIALLQALNHDDTAVCVRAERAMNT
RLEGGCQVPIGSFAVLEGDELWLRGLVGAPDGSVMVSGERRGPRDQAEQMGISLADELLNGGAREILRDVYQGQPPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-81 61
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-81 61