Gene Information

Name : yfcI (PAJ_3242)
Accession : YP_005936118.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : transposase YfcI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3871338 - 3872252 bp
Length : 915 bp
Strand : +
Note : similar to Klebsiella pneumoniae, putative cytoplasmic protein (NCBI: NP_943500.1) COG: general function prediction only subcellular localization as predicted by Psort 2.0: unknown

DNA sequence :
ATGAAAAAAAACACTACGCCAACACCGCACGATGCGACTTTCCGGCAATTTTTAACCCAGCCCGAAATTGCCCGCGATTT
TATGGATATTCATCTCCCTGAAGAGCTGCGCGCTGTTTGTGATCTCAATACGTTAAAGCTGGAGTCAGGTTCTTTTGTCG
AAGCGGATCTTCGTCAATATTTTAGCGATGTGCTTTACAGCCTGAAAACCGCAGGCGGTGAGGGTTATGTTCATGTGTTG
ATCGAGCATCAGTCTTCACCCGATAAACATATGGCGTTCAGGCTCCTGCGCTACGTGGTAGCGGCAATGCAGCGCCATCT
CGAAGCTGGCCATAAAGCCTTGCCGCTGGTGATACCCGTACTGTTTTATATGGGGAGACGCAGGCCATATCCTTATTCCA
CCTGTTGGCTGGATGAATTTACCCATCCCGCGCTGGCCGGTAAATTGTACAGCACCCGCTTTCCGCTGGTTGATGTCACG
GTAATATCGGATGACGAAATAGCGGGCCATCGCAGTATGGCTGCGCTGACGCTGTTACAAAAGCATATCCATCAGCGCGA
TCTCGCCGATCTGATGGACAGGCTTGTTCCTGTGCTGCTGTCAGGTTATCTTTCATCATCACAGGTCGTATCATTGGTAC
ATTATATCATGCAGGCGGGGGAAACCCCGGCCGTCGAGGCTTTCATTCAGGAACTCGCCCTGCGGGTGCCGCAACATGGA
GACGCGCTCATGACCATTGCACAGCAGCTTGAACAAAAAGGTATTCAGAAAGGCCTTGAGCAAGGTATTCAGAGAGGCCG
CGATGAAGGGAAACGTGAAGTCGCGCGAACCATGCTACAGAATGGTCTCGATCTTTACACCATAATGAAAATGACAGACC
TGAGTGAGGAAGAACTGGCGCAGATTCAACACTGA

Protein sequence :
MKKNTTPTPHDATFRQFLTQPEIARDFMDIHLPEELRAVCDLNTLKLESGSFVEADLRQYFSDVLYSLKTAGGEGYVHVL
IEHQSSPDKHMAFRLLRYVVAAMQRHLEAGHKALPLVIPVLFYMGRRRPYPYSTCWLDEFTHPALAGKLYSTRFPLVDVT
VISDDEIAGHRSMAALTLLQKHIHQRDLADLMDRLVPVLLSGYLSSSQVVSLVHYIMQAGETPAVEAFIQELALRVPQHG
DALMTIAQQLEQKGIQKGLEQGIQRGRDEGKREVARTMLQNGLDLYTIMKMTDLSEEELAQIQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilW CAF28495.1 putative transposase Not tested YAPI Protein 1e-94 62
YE3497 YP_001007658.1 putative transposase Not tested YAPI Protein 3e-92 61
YpsIP31758_3726 YP_001402680.1 transposase Not tested YAPI Protein 2e-93 61
tnp AAN64216.1 transposase Not tested necrotizing factor locus Protein 5e-84 54
PMI2627 YP_002152329.1 transposase Not tested Not named Protein 1e-67 49