Gene Information

Name : xylA (PAJ_3203)
Accession : YP_005936079.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : xylose isomerase XylA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3825498 - 3826820 bp
Length : 1323 bp
Strand : -
Note : similar to Pantoea sp. At-9b, xylose isomerase (NCBI: ZP_05729685.1) COG: carbohydrate transport and metabolism subcellular localization as predicted by Psort 2.0: cytoplasmic

DNA sequence :
ATGCACGCTTATTTTGACCAGCTTGATCGCGTTCGCTACGAAGGAACAAAAACCACCAATCCTCTGGCGTTCCGCCACTA
CAATCCGGATGAAGTGATCATGGGGAAAACCATGGCCGAGCATCTGCGCTTCGCCGCCTGTTACTGGCATACGTTCTGCT
GGAACGGTGCCGATATGTTTGGCGCGGGTGCGTTTGATCGTCCGTGGCAGAAAGCGGGCGAGGCGCTGGATCTGGCCAAA
CTCAAAGCGGACGTGGCGTTTGAGTTTTTTCACAAGCTGAACGTGCCCTATTACTGCTTCCACGATGTGGACGTGTCACC
GGAAGGGGATTCGCTGAAAAGCTATCGCGAAAACCTGGCCGTCATGACCGATAAACTGCTGGAAAAGCAGCAGGAAACCG
GGCTTAAGCTGCTGTGGGGCACAGCGAACTGCTTCACCCATCCGCGTTATGGTGCAGGCGCTGCAACCAGTCCCGATCCG
GAGGTGTTTTCCTGGGCAGCCAGCCAGGTATGCAGTGCCATGAAAGCCACCCAGACGCTGGGCGGCGAAAACTATGTGCT
GTGGGGCGGTCGCGAAGGATACGAAACCCTGTTAAATACCGACCTGCGCCAGGAGCGCGAGCAGATCGGCCGCTTTATGC
AAATGGTGGTGGAGCACAAGCACAAAATCGGCTTCCAGGGCACGCTGCTGATCGAACCTAAGCCGCAGGAACCCACCAAG
CATCAGTATGATTATGATGTCGCCACGGTTTATGGCTTCCTGAAGCAGTTTGGTCTGGAAAAAGAGATTAAGGTGAACGT
CGAAGCGAACCATGCGACGCTGGCCGGCCACGCTTTCCATCATGAAATTGCAACGGCCATTGCCCTTGGCGTGTTTGGTT
CGGTGGATGCTAACCGTGGTGATCCGCAGTGCGGCTGGGATACGGACCAGTTCCCGGTCAGCGTGGAAGAAAACGCATTG
GTGATGTACGAAATCATCAAAGCAGGCGGTTTCACGACCGGCGGCCTAAACTTTGATGCCAAAGTGCGCCGTCAGAGCAC
CGATAAGTATGACCTGTTCTATGGTCATATTGGCGCGATGGATACCATGGCACTGGCGTTGAAAGTCGCGGCGCGCATGC
TGTCTGACGGTGAGCTGGATAAACGCGTTGCGCAGCGCTACAGCGGCTGGAACGGTGAGTTCGGCCAGCAGATTTTGAAA
GGCGAGTTCTCTCTGGACGCGCTGGCGGCCCATGCGCATCAGCAGCAGTTTAACCCGCAGCACAACAGTGGACGTCAGGA
GCAGCTGGAAAACCTGGTGAATCACTATCTCTATGATTTTTAA

Protein sequence :
MHAYFDQLDRVRYEGTKTTNPLAFRHYNPDEVIMGKTMAEHLRFAACYWHTFCWNGADMFGAGAFDRPWQKAGEALDLAK
LKADVAFEFFHKLNVPYYCFHDVDVSPEGDSLKSYRENLAVMTDKLLEKQQETGLKLLWGTANCFTHPRYGAGAATSPDP
EVFSWAASQVCSAMKATQTLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTK
HQYDYDVATVYGFLKQFGLEKEIKVNVEANHATLAGHAFHHEIATAIALGVFGSVDANRGDPQCGWDTDQFPVSVEENAL
VMYEIIKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKVAARMLSDGELDKRVAQRYSGWNGEFGQQILK
GEFSLDALAAHAHQQQFNPQHNSGRQEQLENLVNHYLYDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 3e-98 49
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 3e-98 49