Gene Information

Name : qseB (PAJ_3174)
Accession : YP_005936050.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3792656 - 3793327 bp
Length : 672 bp
Strand : +
Note : similar to Pantoea sp. At-9b, two component transcriptional regulator, winged helix family (NCBI: ZP_05729598.1) COG: signal transduction mechanisms subcellular localization as predicted by Psort 2.0: cytoplasmic

DNA sequence : 
ATGCGAATTTTACTGATTGAAGACGACCGCCTGATTGGAGACGGCATTAAAGCGGGACTCAGTAAGCTGGGATTCAGCGT
TGACTGGTTTGTCTCTGGCGAGGCCGGTTTTCAGGCATTAACGGCGGCGCCGTGGGATGCGGTCGTACTCGATTTATCAC
TGCCTGAGCGTGACGGGCTGGACATATTGCGTCAATGGCGTCAGCAGGGGCACGATGTCCCGGTTCTTATCCTTACCGCC
CGCGATGCGCTTGATCAACGCGTTGAAGGATTACAGATGGGGGCTGACGATTACCTGTGCAAACCCTTTGCCCTTACAGA
AGTTGCCGCACGCTTACAGGCACTGATTCGCCGCCGCCACGGGCAACTCCAGCCCGAACTGCGTCATGGCGATGTAGTGT
TGATTCCCGGTAATCTCTGCGTGGAAAGAAACGGCGAAAATATCGCGTTAAAAAGCCGTGAGCTGGCCCTGCTTGAGCTG
TTTATGCGAAATCCGGATCGGGTACTGACGCGAAGCCAGCTTGAAGAAAAGCTCTATACCTGGGATACCGAAGTGTCGAG
CAATGCGGTAGAAGTGCATATCCATCATCTGCGTAAAAAACTCGGTAACCGCTTTATCCGCACCATCCACGGCGTGGGCT
ATACGCTGGGGGAAAGCGAATGCGATCGATGA

Protein sequence : 
MRILLIEDDRLIGDGIKAGLSKLGFSVDWFVSGEAGFQALTAAPWDAVVLDLSLPERDGLDILRQWRQQGHDVPVLILTA
RDALDQRVEGLQMGADDYLCKPFALTEVAARLQALIRRRHGQLQPELRHGDVVLIPGNLCVERNGENIALKSRELALLEL
FMRNPDRVLTRSQLEEKLYTWDTEVSSNAVEVHIHHLRKKLGNRFIRTIHGVGYTLGESECDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-37 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_005936050.1 transcriptional regulatory protein QseB BAC0487 Protein 2e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_005936050.1 transcriptional regulatory protein QseB VFG1390 Protein 6e-35 43
qseB YP_005936050.1 transcriptional regulatory protein QseB VFG0473 Protein 1e-38 43