Gene Information

Name : glnA (PAJ_3152)
Accession : YP_005936028.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3764583 - 3765992 bp
Length : 1410 bp
Strand : +
Note : similar to Pantoea agglomerans, glutamine synthetase (NCBI: AAN37400.1) COG: amino acid transport and metabolism subcellular localization as predicted by Psort 2.0: cytoplasmic

DNA sequence :
ATGTCCGCTGAACACGTTCTCTCGATGATGAACGAGCATGAAGTTAAGTTTGTTGACCTGCGTTTTACCGATACCAAAGG
TAAAGAACAGCACGTTACTATTCCGGCTCACCAGGTTAACGCTGACTTCTTCGAAGAAGGCAAGATGTTCGATGGCTCTT
CCATCGGCGGCTGGAAAGGCATTAACGAATCAGACATGGTGCTGATGCCGGATGCAACCACGGCGGTAATGGATCCTTTC
TTTGAAGATTCTACCCTGATCATTCGTTGCGACATTCTTGAGCCAGGCACCATGCAGGGCTATGACCGCGATCCACGTTC
TATCGCTAAGCGCGCGGAAGATTACCTGCGTTCTTCAGGCATTGCGGATACCGTTCTGTTTGGCCCAGAGCCAGAGTTCT
TCCTGTTTGACGATATTCGTTTTGGTTCTTCAACTTCGGGTTCTCATGTTGCTATCGACGATATCGAAGCAGCCTGGAAC
ACCGGCAAAGAATACGAAGGCGGCAACAAAGGCCACCGTCCAGGCCTGAAAGGCGGTTACTTCCCGGTTCCACCGGTTGA
CTCATCACAGGACATCCGTTCTGCCATGTGTCTGACCATGGAGCAAATGGGTCTGGTTGTTGAAGCCCATCACCATGAAG
TTGCAACAGCAGGTCAGAACGAAGTGGCTACCCGCTTCAATACCATGACCAAAAAAGCTGACGAAATTCAGATCTACAAA
TATGTCGTTCACAACGTGGCTCATGCCTACGGCAAAACGGCGACCTTTATGCCAAAACCGATGTTTGGTGATAATGGTTC
CGGTATGCACTGCCATATGTCGCTGTCTAAAGGCGGTCAGAACCTGTTCTCTGGCGATAAGTACGGCGGCCTGTCTGAAA
TGGCGCTGTTCTACATTGGCGGCATCATCAAGCATGCTAAAGCTATTAACGCCCTGGCGAACCCAACCACCAACTCCTAC
AAGCGTCTGGTGCCGGGTTATGAAGCGCCGGTGATGCTGGCCTATTCAGCGCGTAACCGTTCAGCCTCAATCCGTATCCC
GGTTGTTGCCAGCCCGAAAGCACGTCGTATTGAAGCGCGCTTCCCGGATCCAGCGGCTAACCCATACCTGGCGTTTACCG
CACTGCTGATGGCGGGTCTTGATGGCATCATCAACAAGATCCATCCTGGCGATGCGATGGACAAAAACCTGTATGACCTG
CCACCGGAAGAAGAAGCTGAAATTCCAAAAGTTGCAGGTTCACTGGAAGAAGCGCTGATTGCCCTGAACGAAGACCGCGA
GTTCCTGACCCGTGGCGGCGTGTTCACTGATGACGCGATCGATGCCTATATCGAACTGCGTAAATCCGAAAACGATCGTG
TGCGCATGACGCCGCACCCGGTTGAGTTCGAACTGTACTACAGCGTTTAA

Protein sequence :
MSAEHVLSMMNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNADFFEEGKMFDGSSIGGWKGINESDMVLMPDATTAVMDPF
FEDSTLIIRCDILEPGTMQGYDRDPRSIAKRAEDYLRSSGIADTVLFGPEPEFFLFDDIRFGSSTSGSHVAIDDIEAAWN
TGKEYEGGNKGHRPGLKGGYFPVPPVDSSQDIRSAMCLTMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYK
YVVHNVAHAYGKTATFMPKPMFGDNGSGMHCHMSLSKGGQNLFSGDKYGGLSEMALFYIGGIIKHAKAINALANPTTNSY
KRLVPGYEAPVMLAYSARNRSASIRIPVVASPKARRIEARFPDPAANPYLAFTALLMAGLDGIINKIHPGDAMDKNLYDL
PPEEEAEIPKVAGSLEEALIALNEDREFLTRGGVFTDDAIDAYIELRKSENDRVRMTPHPVEFELYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 8e-101 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_005936028.1 glutamine synthetase VFG1399 Protein 1e-113 50