Gene Information

Name : rph (PAJ_3127)
Accession : YP_005936003.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : ribonuclease Rph
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3734709 - 3735425 bp
Length : 717 bp
Strand : -
Note : similar to Yersinia aldovae ATCC 35236, ribonuclease PH (NCBI: ZP_04621595.1) COG: translation, ribosomal structure and biogenesis subcellular localization as predicted by Psort 2.0: cytoplasmic

DNA sequence :
ATGCGTCCAGCAGGCCGTAGCGCACATCAGGTGCGTCCAGTCACATTGACCCGCAATTACACTAAACACGCAGAAGGTTC
CGTTCTGGTGGAATTCGGTGAAACCAAAGTGCTCTGCACTGCCACGGTGGATGAAGGTGTTCCGCGCTTCCTCAAAGGAC
AGGGACAGGGCTGGGTCACTGCCGAATATGGCATGTTGCCGCGTTCAACGCATAGCCGCATGGCACGTGAAGCCGCGAAA
GGCAAACAGGGCGGCCGCACGCTGGAAATTCAGCGTCTGATCGCCCGTTCACTCCGCGCAGCCGTCGATCTTAAAGTGCT
GGGTGAATATACCATTACGCTTGATTGCGACGTCATCCAGGCTGATGGTGGCACCCGTACCGCATCTATCACCGGCGCCT
GCGTGGCACTGGCGGATGCACTAAACAAACTGGTTGCCAGCGGTAAGCTCAAAGCGAACCCGATGAAAGGGATGGTCGCG
GCGGTATCTGTGGGCATCGTTAACGGTGAAGCCCTGTGTGACCTTGAATATGTTGAAGACTCCGCTGCTGAAACCGATAT
GAACGTCGTGATGATGGAAGACGGCCGTATGATCGAGGTGCAGGGCACGGCGGAAGGCGAACCTTTCAGCCATGAAGAGT
TGCTGGCACTGCTGGCGCTGGCCCGCGGCGGCATCGAAGAGTTAATTCAGGCGCAAAAAGCGGCGTTGGAAAAATAA

Protein sequence :
MRPAGRSAHQVRPVTLTRNYTKHAEGSVLVEFGETKVLCTATVDEGVPRFLKGQGQGWVTAEYGMLPRSTHSRMAREAAK
GKQGGRTLEIQRLIARSLRAAVDLKVLGEYTITLDCDVIQADGGTRTASITGACVALADALNKLVASGKLKANPMKGMVA
AVSVGIVNGEALCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEELLALLALARGGIEELIQAQKAALEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-60 58