Gene Information

Name : aldA (PAJ_0310)
Accession : YP_005933186.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase AldA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 376935 - 378455 bp
Length : 1521 bp
Strand : +
Note : similar to Pantoea sp. At- 9b, aldehyde dehydrogenase (NCBI: ZP_05727471.1) COG: energy production and conversion subcellular localization as predicted by Psort 2.0: cytoplasmic

DNA sequence :
ATGCGTTATGCCCATCCCGGCACACCTGGTGCGTTAGTGACGTTTAAATCTGCCTACGGCAACTACATTGATGGCAAATT
TATCGAGCCGCTGAGTGGTGAGTACTTCATGAATACCTCACCCGTCAACGGCAGTGACATTGCCCGGTTTCCTCGTTCCG
ATGCGCGCGATATTGATTTAGCGCTGGATGCCGCGCACCGGGCTGCAGAAGCCTGGGGAAAAACCTCCGTACAAACCCGA
TCTAATCTGCTGCTCCAGGTGGCTGATCGCATTGATGCCAATCTCGAAACCCTGGCCGTGGCGGAAAGCTGGGACAACGG
CAAACCGATTCGGGAAACGCTCAATGCCGATCTGCCGCTGGCGGCCGACCATTTTCGTTACTTCGCAGGATGCCTGCGCG
CGCAGGAGGGCAGCACGGGCGAGATCGATGAAAAAACCGTGGCCTACCATTTTCATGAGCCGCTGGGCGTGGTGGGGCAA
ATTATTCCCTGGAATTTTCCGTTGCTGATGGCCGCATGGAAGCTGGCGCCGGCCCTGGCTGCCGGTAACTGCGTGGTGCT
TAAGCCTGCGGAGCAAACTCCGCTGGGCATTACGCTGCTGATGGAGATGATCGGCGACCTGTTTCCTGCAGGCGTGCTAA
ACGTGGTACAGGGTTTCGGCCGCGAGGCGGGCGAAGCGTTGGCAACCAGTAAACGCATTGCCAAAATCGCCTTCACCGGT
TCTACGCCGGTGGGACGTCATATCATGGCCTGTGCCGCAGAAAATATTATTCCCTGTACCGTGGAGCTGGGCGGGAAATC
GCCGAACATCTACTTCGCCGACATCATGAATGGCGAGCCGGACTTTATTGACAAGGCGGTGGAAGGACTGGTGCTGGGCT
TCTTTAATCAGGGCGAGGTATGTACCTGTCCGTCCCGTGCGCTAATCCATGAGTCCGTTTACGCGCCTTTCATGGAGCGG
GTGATGGCCAAAGTCGCCACCATTCGTCGCGGCGATCCGCTCGATACCGACACGATGATTGGCGCCCAGGCTTCGCGTCA
GCAGTTCGATAAAATTTTGTCGTATATCGAGATTGCCCGCAACGAAGGGGGCGAGATCCTGACCGGGGGTGAGCGGGCCT
TGATATCGTCCGAACTGGATAACGGTTTCTATATTCAGCCCACGCTGATTAAAGGCAGCAACAGCATGCGCTGCTTTCAG
GAGGAAATTTTTGGCCCGGTTATCGGCATCACCACCTTCAAAGATGAGGCTGAAGCCTTGCGTATTGCCAATGAAACCCA
GTTTGGATTGGGGGCGGGCGTCTGGACGCGGGACAGCAATTTAGCCTACCGCATGGGGCGGGCCATCAAAGCCGGGCGCG
TCTGGACCAACTGTTACCACATCTATCCGGCCCATGCTGCCTTTGGGGGTTACAAACAGTCCGGCGTGGGTCGCGAAACA
CACAAAATGGCACTCAACCAGTACCAGCAGACCAAAAACCTGTTAGTCAGCTATGACACGGCACCGCTGGGGCTGTTTTA
A

Protein sequence :
MRYAHPGTPGALVTFKSAYGNYIDGKFIEPLSGEYFMNTSPVNGSDIARFPRSDARDIDLALDAAHRAAEAWGKTSVQTR
SNLLLQVADRIDANLETLAVAESWDNGKPIRETLNADLPLAADHFRYFAGCLRAQEGSTGEIDEKTVAYHFHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLGITLLMEMIGDLFPAGVLNVVQGFGREAGEALATSKRIAKIAFTG
STPVGRHIMACAAENIIPCTVELGGKSPNIYFADIMNGEPDFIDKAVEGLVLGFFNQGEVCTCPSRALIHESVYAPFMER
VMAKVATIRRGDPLDTDTMIGAQASRQQFDKILSYIEIARNEGGEILTGGERALISSELDNGFYIQPTLIKGSNSMRCFQ
EEIFGPVIGITTFKDEAEALRIANETQFGLGAGVWTRDSNLAYRMGRAIKAGRVWTNCYHIYPAHAAFGGYKQSGVGRET
HKMALNQYQQTKNLLVSYDTAPLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-149 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-155 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-155 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-155 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-154 65
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-55 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldA YP_005933186.1 aldehyde dehydrogenase AldA VFG0082 Protein 3e-149 66