|
Name : kdpB (PAJ_3009) Accession : YP_005935885.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit KdpB Function : - COG functional category : - COG ID : - EC number : - Position : 3600231 - 3602276 bp Length : 2046 bp Strand : - Note : similar to Pantoea sp. At-9b, K+-transporting ATPase, B subunit (NCBI: ZP_05732021.1) COG: inorganic ion transport and metabolism subcellular localization as predicted by Psort 2.0: inner membrane DNA sequence : ATGAGTCGTCAACAACAGGTGTTTGACGCAGCGCTGTTACGTACCTCAGCGATCGATGCGGTAAAAAAACTCGATCCTCG CGTGCAGTTTCGCAATCCGGTCATGTTTGTGGTTTACCTGGGCAGTATCCTGACCTCGATTCTGGCCATAATGATGTTTA CCGGACACCAGAGCGGCAGCGCCAGCTTTACCGGCGCGATTGCCCTGTGGTTATGGTTCACCGTGCTGTTTGCCAACATG GCAGAAGCCCTGGCGGAAGGGCGCAGTAAAGCCCAGGCAAACAGCCTGAAAGGCGTTAAAAAGACCAGCTTCGCCAAAAA ACTGTCGGCGGCGCACTACGGTGCAGCGTGGCAGCAGGTGGCGGCCGATGCGCTGCGTAAAGGGGATGCCGTGCTGGTAG AGGCCGGTGATGTGATCCCCTGCGACGGTGAAGTCGTGGAAGGGGGCGCATCGGTAGACGAGAGCGCGATCACCGGTGAA TCGGCACCGGTGATCCGTGAATCGGGCGGGGATTTCGCCTCGGTGACCGGCGGGACACGCATTCTGTCTGACTGGCTGGT CATTACCTGCAGCGCCAACCCAGGCGAAACCTTCCTGGACCGGATGATCGCCATGGTCGAAGGCGCACAGCGTCGTAAAA CCCCGAATGAGATTGCCCTGACCATTCTGCTGGTGTCGCTCACCATTGTGTTTCTGTTAGCCACCGTCACGCTGTGGCCT TTTTCAGCCTGGGGCGGCACGCCGGTCACCATCACCGTACTGGTGGCGCTGCTGGTATGCCTGATCCCGACCACCATTGG CGGTCTGCTGTCCGCTATCGGCGTGGCCGGGATGAGCCGGATGCTGGGCGCTAACGTCATTGCCACCAGTGGCCGCGCTG TTGAAGCCGCTGGCGACGTGGATGTGCTGATGCTGGATAAAACCGGCACCATCACGCTGGGTAACCGTCAGGCAACGCAG TTTTTACCGGCTCCCGGCGTCACGGAAGAACAGCTGGCGGATGCGGCGCAGCTGGCGTCCCTGGCGGATGAAACGCCGGA AGGGCGCAGCATCGTGGTGCTGGCGAAGCAAAAGTTTAACCTGCGTGAACGTGACCTGAGCAGCATGGGCGCCAGCTTTA TTCCCTTCTCGGCTCAAACCCGTATGAGCGGCGTCAACGTACAGGACCGCCTGATCCGTAAAGGTGCGGTCGATGCGGTG CGCCGTCATATTGAAGCCAGCCACGGTGCCTTTCCGGCTGAGGTGAACGCCCGGGTTGAAGAGGTGGCGCGGGCCGGTGG CACACCGCTGGTGGTGGCGGAAGGCGCAAAGGTGCTGGGCGTGGTGGCGCTAAAAGATATCGTTAAAGGTGGCATCAAAG AACGTTTTGCGGAACTGCGCAAGATGGGCATTAAAACCGTGATGATCACCGGTGATAACCCGCTCACCGCCGCCGCCATC GCGGCAGAGGCAGGGGTGGATGACTTTCTGTCAGAAGCGACGCCGGAAGCCAAGCTGGCACTGATTCGTCAGTATCAGGC GGAGGGGCGCTTAGTCGCGATGACCGGTGACGGCACCAATGACGCGCCAGCGTTGGCCCAGGCGGACGTGGCGGTCGCCA TGAACTCGGGTACTCAGGCGGCGAAAGAAGCGGGCAACATGGTCGATCTGGACTCGAACCCCACCAAACTGCTGGAAGTG GTGCACATTGGTAAGCAGATGCTGATGACGCGCGGTTCCTTGACCACCTTCAGTATCGCCAATGACGTTGCCAAGTATTT CGCCATCATCCCGGCCGCCTTTGCTGCAACCTATCCACAGTTAAATATGCTCAACGTGATGCAGCTGCACTCGCCCGCAT CGGCCATCCTGTCGGCCGTGATTTTTAACGCCCTAGTGATTGTATTCCTGATCCCTCTGGCGCTTAAAGGTGTCAGCTAT CGCCCCTTGAGTGCCGCATCGCTGTTGCGCCGTAATTTACTGATTTATGGGTTAGGTGGGCTGCTGGTGCCCTTTGTCGG CATCAAAGCGATTGATATGTTGCTCGTGCTGTCTGGTATGGCCTGA Protein sequence : MSRQQQVFDAALLRTSAIDAVKKLDPRVQFRNPVMFVVYLGSILTSILAIMMFTGHQSGSASFTGAIALWLWFTVLFANM AEALAEGRSKAQANSLKGVKKTSFAKKLSAAHYGAAWQQVAADALRKGDAVLVEAGDVIPCDGEVVEGGASVDESAITGE SAPVIRESGGDFASVTGGTRILSDWLVITCSANPGETFLDRMIAMVEGAQRRKTPNEIALTILLVSLTIVFLLATVTLWP FSAWGGTPVTITVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLMLDKTGTITLGNRQATQ FLPAPGVTEEQLADAAQLASLADETPEGRSIVVLAKQKFNLRERDLSSMGASFIPFSAQTRMSGVNVQDRLIRKGAVDAV RRHIEASHGAFPAEVNARVEEVARAGGTPLVVAEGAKVLGVVALKDIVKGGIKERFAELRKMGIKTVMITGDNPLTAAAI AAEAGVDDFLSEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLLEV VHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNMLNVMQLHSPASAILSAVIFNALVIVFLIPLALKGVSY RPLSAASLLRRNLLIYGLGGLLVPFVGIKAIDMLLVLSGMA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 5e-178 | 63 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-178 | 63 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 7e-150 | 55 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-148 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-148 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-148 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-148 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-148 | 54 |
