Gene Information

Name : ybaD (PAJ_0294)
Accession : YP_005933170.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : transcriptional regulator YbaD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 362725 - 363174 bp
Length : 450 bp
Strand : +
Note : similar to Pantoea sp. At-9b, ATP-cone domain protein (NCBI: ZP_05727456.1) COG: transcription subcellular localization as predicted by Psort 2.0: unknown

DNA sequence :
ATGCATTGCCCATTCTGCTCCGCTGTAGACACTAAAGTGATTGATTCTCGTCTGGTTAGTGAGGGTTCGTCAGTGCGGCG
CCGTCGTCAATGTCTGGTGTGCCATGAGCGTTTCACTACGTTTGAAGTGGCTGAACTGGTGATGCCGCGCGTGGTGAAAA
GCAACGACGTGCGTGAGCCTTTCAATGAAGACAAGCTGGCCAGCGGCATGATGAAAGCGCTGGAGAAGCGTCCGGTTAGT
GCGGATGCCGTTGAGAGTGCGGTAAGCCATATTAAAACCCAACTGCGGGCGACAGGAGAACGTGAAATCCCCAGCAAGCT
GATTGGCAACCTGGTGATGGACGAGCTGAAGAAGCTCGATAAGGTAGCCTATATCCGCTTTGCTTCTGTTTACCGCAGCT
TTGAGGACGTGCGTGATTTTGGCGAAGAGATTGCCAGATTACAGGATTAA

Protein sequence :
MHCPFCSAVDTKVIDSRLVSEGSSVRRRRQCLVCHERFTTFEVAELVMPRVVKSNDVREPFNEDKLASGMMKALEKRPVS
ADAVESAVSHIKTQLRATGEREIPSKLIGNLVMDELKKLDKVAYIRFASVYRSFEDVRDFGEEIARLQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00288 YP_008207753.1 putative transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Not tested AbaR25 Protein 3e-41 56
BJAB0868_00292 YP_008211618.1 putative transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Not tested AbaR26 Protein 3e-41 56