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Name : gabD (PAJ_2780) Accession : YP_005935656.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NADP+] GabD Function : - COG functional category : - COG ID : - EC number : - Position : 3361880 - 3363358 bp Length : 1479 bp Strand : - Note : similar to Enterobacter sp. 638, succinate semialdehyde dehydrogenase (NCBI: YP_001178384.1) COG: energy production and conversion subcellular localization as predicted by Psort 2.0: cytoplasmic DNA sequence : ATGACAAACCGACAGGAGCACCTAATGCATTCTTTACTGCACGACAGCGAACTGTTCCAGACAGGCTATCTGGTAAACGG GCAATGGCTGCGTACCACGTCTACCTTTGACGTGACGAATCCTGCCACGGGCGAGGTCGTCGCTCAGGTGGCAAAAGCAG GAAAAACGGAAACGGAAGCTGCAATAAAGGCTGCCCAGGATGCTTTCCCAGCGTGGCGAGCACAGACCGCCAAGGGGCGT TCAGAACTGCTGTACCGCTGGTATAGGTTAATCATTGAACACAAACGCTGGCTGGCTGAGTTAATGACAACGGAGCAAGG CAAGCCGCTCAAGGAAGCAGAAGGCGAAGTGGAATATGCCGCCAGCTTTATTCAATGGTTCGCCGAGCAAGCTAAACGGG CTAACGGTGAAATCATCCCTCCTGCTAAAGCGGGCTCGCGCATTCTGGCAACCCGTGAGCCGGTCGGCGTCGTCGCCGCT ATCACGCCCTGGAATTTCCCTATGGCGATGCTGACACGTAAGTTAGGCCCGGCGCTGGCAGCGGGATGTACAGGCATTAT TAAACCCGCGAATAACACACCGCTTTCCGCATTTGCCTTACTGGCGCTGGCAAAAAAAGCCGGCATCCCTGATGGCGTGC TTAACGGTGTAGCAGGCGACACGCATGCCATTAGCGATGCCATTATGGCCAGCAAAGCCGTACGTAAAATTTCCTTTACC GGTTCGACGGCAGTGGGGAAAACGCTAATGCGTAACGCTGCTGAAACCATGAAAAAGGTTTCGATGGAACTGGGCGGTAA TGCGCCCTATATCGTCTTTGAAGATGCAGATATCGATGCAGCCGTGCAGGGAGCCATCGCCAATAAATTCCGCAATGCCG GTCAGGTTTGTGTCAGCGTTAACCGCTTTTTCATTCACAGTGCAGTTTACGAACGTTTTACGACCCAACTGGCCGCTGAA GTGGATAAGCTTAGCGTCGGAAACGGCATGGATAATGGCGTGGTCGTCGGCCCGTTAATCGAATCATCCGCATTAGAAAA AGTCGAAGAGCATGTCAAAGATGCCATTGCTCAGGGCGGAAAAGTGCTGACGGGTGGTCAGCGGCACGCGCTGGGCGGTA ATTTTTGGCAGCCAACGGTCATTGTTGAGGCACATGAAGGCATGAAACTGGCTCAGGAAGAAACGTTTGGCCCGGTGGCA GCCTGTTTCCGCTTTGATGACGAAGAAGAGGTTATCCGTCGTGCCAACCAGACGGAATACGGGCTGGCGGCGTATTTTTA TACGCAAAACCTGCAGCGGGTATTCCGGGTCTCTGCCGCGCTCGAAAGTGGAATGATTGGCATCAATGAGTGTGCGGTCT CGACAGAGTTGGCCCCCTTTGGCGGCGTGAAAGAGTCTGGTCTGGGACGTGAAGGATCGGTACTGGGGATGGATGAGTAC CTGGAGGTCAAAGCGCTGCACCTCGGCGGGTTAAGTTAG Protein sequence : MTNRQEHLMHSLLHDSELFQTGYLVNGQWLRTTSTFDVTNPATGEVVAQVAKAGKTETEAAIKAAQDAFPAWRAQTAKGR SELLYRWYRLIIEHKRWLAELMTTEQGKPLKEAEGEVEYAASFIQWFAEQAKRANGEIIPPAKAGSRILATREPVGVVAA ITPWNFPMAMLTRKLGPALAAGCTGIIKPANNTPLSAFALLALAKKAGIPDGVLNGVAGDTHAISDAIMASKAVRKISFT GSTAVGKTLMRNAAETMKKVSMELGGNAPYIVFEDADIDAAVQGAIANKFRNAGQVCVSVNRFFIHSAVYERFTTQLAAE VDKLSVGNGMDNGVVVGPLIESSALEKVEEHVKDAIAQGGKVLTGGQRHALGGNFWQPTVIVEAHEGMKLAQEETFGPVA ACFRFDDEEEVIRRANQTEYGLAAYFYTQNLQRVFRVSAALESGMIGINECAVSTELAPFGGVKESGLGREGSVLGMDEY LEVKALHLGGLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-131 | 57 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-79 | 41 |
