Gene Information

Name : D (PAJ_2640)
Accession : YP_005935516.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : protein D
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3196154 - 3197326 bp
Length : 1173 bp
Strand : -
Note : similar to Yersinia mollaretii ATCC 43969, late control protein D protein (NCBI: ZP_04641605.1) COG: general function prediction only subcellular localization as predicted by Psort 2.0: unknown

DNA sequence :
ATGGAGGGCGCTGAGATGAGCGATATCGTCCCGATTCCAGTGCCCCTGCGCGTCGCGCCTACGCCGGACTTTACTATCAA
AATTGAGACGAAAGATAAAACGGAAGATATTCGCCCACGGCTGATTTCTCTGAAGTTAACGGACAACCGCGGCCTGGAGG
TCGATCAGCTGGACCTGGTGCTCGACGACAGTGACGGCCAGTTGGTCATGCCGCCCTTTGGCGCGAAAATAGTCTTAGAG
ATAGGCTGGAAGGGGCAGCCGCTTGCAGATAAAGGCTCCTACATCATTGATCAGGTCACCTACCAGGGCGCGCCGGACAC
GATAACGGTTGTCGCCCGAAGCGCCGATTTTAGCGGTTCGCTCGATGTTAAAATCACTGATTCATATCCAGACATGACGG
TTGGCGAGGTTGTGGACAAAATCGCGAAACGTAACGGACTTACCTCCGACGTGCGGCCGGAGATAGCCAAAAAAAAGATT
AAGCATATCGATCAGACGCAGGAAACGGACGGCACGTTCATTACCCGGCTGGCTATGCTGGTTGGCGCGGTGGCGGCAAT
AAAAGATAAGACGCTACTGTTCTTTCCCCCCGGGCAGGGCGTGACCGTGAGCGGAAAGCCGATTCCACTCCTGAATCTGA
ACCGACAGGATGGCGATAAGTATGAGTACAAATTGTTTAAGCGCGACGATTACAGTGGCGTTGAAGCAAAATGGTACGAT
CAGAAAAAGGCGCAGCAGAAAGGGATAACCGTCAACACGATACCGCCAGCAACACCGGCGGTGAACCCTGTCCATCCGGC
GGCCAAAAATATCCCCACAATCGGGCAACAAGACCCGGGAAAAACCTATGTTTTTGGCAGCAATAAGAAGCTGTTCTTAC
TGAATACGCACTTCAGTAGCCAGGAGGAAGCAGAGGAGGCGGCTAAAGCGAAGTGGCAGGATCTGCAACGTAACCGGGCT
ACGTTGAAGATCCTACTGGCACTGGGCGCTGCAAAGCTGATTCCTGAAACGCCGGTCAAAGCCCAGGGTTTTAAATCGGT
CATCGATAATCAAAAATGGCTGATTACCAATATCGTGCATACCATCGATAAAAGTGGATTTACCACCTTGTTGAACCTGG
AGCTGATGGTTGAAAACGTGGATTACGTCTTAGTGGAAAAACAGGCTGGTTAG

Protein sequence :
MEGAEMSDIVPIPVPLRVAPTPDFTIKIETKDKTEDIRPRLISLKLTDNRGLEVDQLDLVLDDSDGQLVMPPFGAKIVLE
IGWKGQPLADKGSYIIDQVTYQGAPDTITVVARSADFSGSLDVKITDSYPDMTVGEVVDKIAKRNGLTSDVRPEIAKKKI
KHIDQTQETDGTFITRLAMLVGAVAAIKDKTLLFFPPGQGVTVSGKPIPLLNLNRQDGDKYEYKLFKRDDYSGVEAKWYD
QKKAQQKGITVNTIPPATPAVNPVHPAAKNIPTIGQQDPGKTYVFGSNKKLFLLNTHFSSQEEAEEAAKAKWQDLQRNRA
TLKILLALGAAKLIPETPVKAQGFKSVIDNQKWLITNIVHTIDKSGFTTLLNLELMVENVDYVLVEKQAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4601 NP_458684.1 putative regulator of late gene expression Not tested SPI-7 Protein 7e-52 42
t4295 NP_807892.1 regulator of late gene expression Not tested SPI-7 Protein 7e-52 42