Gene Information

Name : PAJ_2539 (PAJ_2539)
Accession : YP_005935415.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3077031 - 3077990 bp
Length : 960 bp
Strand : +
Note : similar to Erwinia pyrifoliae Ep1/96 (NCBI:YP_002647508.1)

DNA sequence :
ATGTCTGATAACATAACATTCGATGACTTACTGAATGATTATTTCTTCAGTAAATCACTCCGTGAAGCAACAGAATGGAG
TTACCGCAAAGTCGTAAAAACATTCGTTCAGTTTGCAGGGCCGGATATAGTCCCTGAAAAAGTTACGAATCATATGGTAC
TGACCTGGAGAAGGAAAGTCATCGCGGATGAGAAACTGTCAAAAATAACCTGGAATAATAAACTGACCCATATGCGGGCA
ATTTTCAATTTTGCCATTCACAAGGGGTATATCTCCCCCCGTGAAAACCCGTTTAACGGGGCCATTGCCAGACCCGATGT
TAAGCGTAAAAAAACGCTGACTGATGCCCAGATAAAAAAAATCTATCTCATCATGGAGGCCCGTGAGCAGGATGAATTCT
TTGGCGTAGGTCAGGTACGTAAGAATGCACTCCGGCCATGCTGGTTCTGGCTGACAGTGCTGGATGCGTTACGCCGGACA
GGAATGCGGCAGAATCAACTCTTACACATCAGGCTCTGCGATGTGAATCTCACTCATAACTGGATCAGTCTCAGGCCAGA
AGGTGCAAAAAATCATCGTGAGCACAGGGTTCCGGTAACCAGCCAGCTGCGCCCGCGTCTGGAAAGGCTGTACAACCTCT
CACTTGAAAGGGGAGCCAAAATGGAAGATCAGCTTTTCAACCTCTCACGGTTTGACGGCCGGAGAAATGAGGTCAGTGAG
AACATGGACAATCCGCCACTCCGTGCTTTTTTCAGGCGACTTTCAAAAGAGTGCGGGTTCGTGGTCAGCCCGCACCGTTT
CCGCCACACGATAGCGACGAACCTTATGAAACTTCCCGATCGCAACCTCAAAATGGCACAGGATCTTCTGGGTCATTCGA
CACCGACAGTAACGCTGCAGTACGTGGAAAGCGATATCGAGAGAGTGAGAAGCGTGATTGAGGAGCTGGATGTGGCGTAG

Protein sequence :
MSDNITFDDLLNDYFFSKSLREATEWSYRKVVKTFVQFAGPDIVPEKVTNHMVLTWRRKVIADEKLSKITWNNKLTHMRA
IFNFAIHKGYISPRENPFNGAIARPDVKRKKTLTDAQIKKIYLIMEAREQDEFFGVGQVRKNALRPCWFWLTVLDALRRT
GMRQNQLLHIRLCDVNLTHNWISLRPEGAKNHREHRVPVTSQLRPRLERLYNLSLERGAKMEDQLFNLSRFDGRRNEVSE
NMDNPPLRAFFRRLSKECGFVVSPHRFRHTIATNLMKLPDRNLKMAQDLLGHSTPTVTLQYVESDIERVRSVIEELDVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3686 YP_001402640.1 phage integrase Not tested YAPI Protein 4e-99 63
api95 CAF28569.1 putative phage integrase Not tested YAPI Protein 2e-99 63
YE3450 YP_001007614.1 phage integrase Not tested YAPI Protein 8e-100 62
STY4666 NP_458745.1 probable phage integrase Not tested SPI-7 Protein 8e-80 55
t4357 NP_807950.1 phage integrase Not tested SPI-7 Protein 8e-80 55