Gene Information

Name : PAJ_2535 (PAJ_2535)
Accession : YP_005935411.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : putative plasmid transfer protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3072240 - 3073448 bp
Length : 1209 bp
Strand : -
Note : similar to Pectobacterium atrosepticum SCRI1043 (NCBI:YP_048665.1)

DNA sequence :
ATGATGAAAGCAAAACTGTTAACCCGCAGCATCATTCTGGCATTACTGGCTTCAGCCGTACCGTCAGTGAATGCTGCAAC
AACCTGGACCGAAGCGCGTAACGACGCCATGGGGGGAACCGGCGTGGCCTCTTCCGGTTATCTGGCCGCTGCACTGGCTA
ATCCCGCGCTGATGACCCGCCACGATGCCGGTGACGACGTCGGGCTCATCCTGCCGGGCGTTGGGGCACAAATCAGCGAT
CCGGATAACCTGCGTGACGGACTGGACAGGGTAAAAAGCACCTTTGACGACTTCCGCGATTCAGCGGGCACCGGCAACAG
CTCACGACAGGCGGCAGCGCTGAAACAGGCCCTGCAGGACGTCGACGGTGACAGCGGGCATGCCAGTGCCGGGCTTTCTG
CGGTGATTGCCATTCCCAATGACACCCTCCCTTTCGCCTTTGTGGCCAAAGGCTGGGGACAGGCGAAGGTCCGCACCGAA
ATCACACAGCGTGACCTGGCGTATCTCGATGCGGCGCAGAGCGGCATTTTCTCACCGACTCAGACGGATATTGACCAGAT
GACCTCCCGGGCGCAGGGCGTTGCCGCACTGGTCACGGAATACGGTATCGCCGCAGCGCATCAGTTTACCCTGGCTGACA
TGCCGGTTTCTGTCGGTATCACGCCAAAGGTCCAGCGAGTGGATACCTGGAACTACAACGTTTCCGTCGGTAACTACAGC
GCGTCGGATTTTCGCAGCGGCGACTGGAAGCGTTCCGAAAGCGGCGCAAACGTCGACGTCGGCTTTGCGGCTCAGCTGAC
GCCAGAGTGGACAGTCGGACTGACCGGACAGAACCTTGTGGCGCGTAACATCAGTACGCGTGAAATCAACGGCATCACGG
ACACGTTCCAGATCCGCCCGCAGGCGACTGCCGGCACGGCGTGGAGCAATGGTTTTGTCACGCTGGCCACAGACGTTGAC
CTGACACCGGCCAGCGGTTTTGCCTCGGATGAAAAAGCGCAGTATGCCGGCGTGGGTGCTGAGCTGAATGCATGGTACTG
GGCGCAGCTGCGTGCCGGTTACCGCGCAGACATGCGCAACAGCGATCGCAGCATGTTTACCGCCGGTGTGGGGATTTCAC
CCTTCAACGTCGTGCATCTCGACCTGACCGGCATGGCCGGCACAGACCGCAGCTATGGCGCTGCCGCGCAGCTTTCTTTC
ACTTTCTGA

Protein sequence :
MMKAKLLTRSIILALLASAVPSVNAATTWTEARNDAMGGTGVASSGYLAAALANPALMTRHDAGDDVGLILPGVGAQISD
PDNLRDGLDRVKSTFDDFRDSAGTGNSSRQAAALKQALQDVDGDSGHASAGLSAVIAIPNDTLPFAFVAKGWGQAKVRTE
ITQRDLAYLDAAQSGIFSPTQTDIDQMTSRAQGVAALVTEYGIAAAHQFTLADMPVSVGITPKVQRVDTWNYNVSVGNYS
ASDFRSGDWKRSESGANVDVGFAAQLTPEWTVGLTGQNLVARNISTREINGITDTFQIRPQATAGTAWSNGFVTLATDVD
LTPASGFASDEKAQYAGVGAELNAWYWAQLRAGYRADMRNSDRSMFTAGVGISPFNVVHLDLTGMAGTDRSYGAAAQLSF
TF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00459.1 unknown Not tested SHI-1 Protein 2e-65 47