Gene Information

Name : PAJ_2510 (PAJ_2510)
Accession : YP_005935386.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3037745 - 3038410 bp
Length : 666 bp
Strand : +
Note : similar to Erwinia pyrifoliae Ep1/96 (NCBI:YP_002647508.1)

DNA sequence : 
ATGGCGGCGATACGCGCTATATTGCGTGTATCGGGTAAAACCTTTATGGCTGATCCAGCTCATCCGAAGTTGAGCAATGA
TGCTTTGAACATCTCTGGTACCAGCCGCGACGGAACTAAGGTTGCAATAACTGATGACTATTTCCAGCAGGTTTTTGCCT
CTGTTAGTAAAAAGGATGAGGGCATCGCCTGTGCAATGAAACTTTCACGGCTTTTAGGTTTACGAACAGAAGAAACTGTA
CAGTCTGTAAAATCGCTTCAGACATGGAAAAAAGCACTGCAGAATGGTGATGAAAAAGTTCGCGTTGTATTTGGCACGAA
AGGAGGGCGACCGAGAGATACCACAATCATAAACCGGGCTGAAACTATTGACGCCATTAATAGAGCAATAACTTATTCTG
CTGAGAATAACGGAAAACTTATCGATAAGCCATCTATTCATCTGGCAATTGAACGATACAGGAATATCGTCCGTGAGGCG
GGACTTGTTGGAGAGTTTGCCCCTCATAGTCTCAGATACGCTTACACTCAGGACGTTCTTAAGTTGCATAGGTATAGAGG
TTTTAGCCAGAAGGAGTCTGAGGCACTTACTTCTATGGATCTAGGTCATGGGGATGGACGCGGGCACTATATATCTCGTG
TTTATAATAAAGTAAGGATTCAGTAG

Protein sequence : 
MAAIRAILRVSGKTFMADPAHPKLSNDALNISGTSRDGTKVAITDDYFQQVFASVSKKDEGIACAMKLSRLLGLRTEETV
QSVKSLQTWKKALQNGDEKVRVVFGTKGGRPRDTTIINRAETIDAINRAITYSAENNGKLIDKPSIHLAIERYRNIVREA
GLVGEFAPHSLRYAYTQDVLKLHRYRGFSQKESEALTSMDLGHGDGRGHYISRVYNKVRIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api85 CAF28559.1 putative integrase Not tested YAPI Protein 2e-69 68
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 4e-71 68
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 4e-72 67
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 2e-54 56
STY4586 NP_458670.1 hypothetical protein Not tested SPI-7 Protein 3e-45 52
t4280 NP_807878.1 hypothetical protein Not tested SPI-7 Protein 3e-45 52
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 3e-48 46
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 3e-48 46