Gene Information

Name : sgcA (PAJ_2453)
Accession : YP_005935329.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Virulence
Product : putative phosphotransferase IIA component SgcA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2956717 - 2957178 bp
Length : 462 bp
Strand : +
Note : similar to Pantoea sp. At-9b, putative PTS IIA-like nitrogen-regulatory protein PtsN (NCBI: ZP_05730228.1) COG: carbohydrate transport and metabolism subcellular localization as predicted by Psort 2.0: unknown

DNA sequence :
ATGCCGAATCTGACCCAATGGCTGAATGCTGAAAAAATTCAATATATTGAGCGCGTATCCGACTGGAAAGCCGCGATTCA
GGTCGCGGGCGATCCTCTTCTTAATGAGGGGGCGATTTCACAGGATTACATTGACACCATCATCCGCCTCAAACAGGAAA
CCGGTCCCTACTTCGTTATTGCGCCGCGCATTGCCATGCCGCATGCCCGCCCTGAGCAGGGTGCCAAAAAGTTGGGATTA
TCCGTAGTCAAGCTGGCTAACCCGGTCACCTTTGATGCCGGAGAGAATGATCCTGTCGATATCCTTTTCATGTTCTCCGC
CCCTGACAGCAACAGCCACATTGAGATGATCTCCCAGCTGGCTGAGGTGCTTACCGATGACGAGGTGATGGAACGCGTTT
ATCAGGCACAAAGCCAACACGCACTCTGTGCCCTGTTGTTAGCAGACAGCATATCCCGTTAA

Protein sequence :
MPNLTQWLNAEKIQYIERVSDWKAAIQVAGDPLLNEGAISQDYIDTIIRLKQETGPYFVIAPRIAMPHARPEQGAKKLGL
SVVKLANPVTFDAGENDPVDILFMFSAPDSNSHIEMISQLAEVLTDDEVMERVYQAQSQHALCALLLADSISR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF10 AAK27337.1 unknown Not tested PAI-I AL862 Protein 3e-24 43
vpeA ADD91727.1 putative PTS system-specific IIA component VpeA Virulence PAI-I AL862 Protein 3e-24 43