Gene Information

Name : tktA (PAJ_2433)
Accession : YP_005935309.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : transketolase 1 TktA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2935014 - 2937008 bp
Length : 1995 bp
Strand : -
Note : similar to Erwinia tasmaniensis Et1/99, transketolase (NCBI: YP_001908733.1) COG: carbohydrate transport and metabolism subcellular localization as predicted by Psort 2.0: unknown

DNA sequence :
ATGCCCTCTCGTAAAGATCTTGCCAACGCCATTCGCGCGTTAAGTATGGACGCAGTGCAAAAAGCTAAATCGGGACATCC
GGGTGCCCCGATGGGCATGGCGGATATCGCCGAAGTCTTGTGGCGCGGCTATCTCAATCATAACCCAACCAACCCACACT
GGGCCGATCGCGACCGTTTTGTTCTGTCCAATGGTCACGGTTCGATGCTGATTTACAGCCTGCTGCACCTTACCGGCTAC
GATTTACCGATTAGCGAGCTGGAAAACTTCCGTCAGTTGCATTCTAAAACGCCGGGGCACCCTGAATATGGCTATACCGT
GGGCGTGGAAACCACGACCGGTCCGCTGGGGCAGGGCATCGCTAACGCCGTAGGTTTTGCCATTGCGGAGCGCACGCTGG
CAGCACAGTTCAACCGTCCGGGCCATGAGATCGTAGATCATAATACCTGGGTCTTTATGGGCGACGGCTGCATGATGGAA
GGCATCTCACACGAAGTGTGCTCGCTGGCGGGTACGCTGAAGCTGGGCAAGCTGGTGGCATTCTATGATGACAATGGTAT
CTCCATCGATGGTCATGTTGACGGCTGGTTCACCGATGACACCGCGAAGCGCTTCGAAGCTTACGGCTGGCATGTGGTGC
GCGGCGTTGACGGTCACGATGCCGACGCCATCGCGAAAGCCATTGAAGAAGCGAAAGCGGTGAGCGACAAGCCGTCACTG
CTGATGTGCAAAACTGTGATCGGTTTTGGTTCACCGAATAAAGCGGGGACCCACGACTCACACGGCGCACCGCTGGGCGA
TGACGAGATTGCGCTCACCCGCAAACAGTTAGGCTGGGACTATCCGCCTTTCGTTATTCCTTCAGACATTTATGCTGAGT
GGGATGCTAAGGAAGTAGGCAAGGCGAAAGAGGATGCGTGGAACACGAAATTCGCGGCCTATGCTAGTGCCTTCCCAGAG
CTGGCTGCAGAATTTACGCGCCGCATGAGCAACGAACTGCCGGCTAACTGGCAGCAGGAATCGCAGAAGTTTATCGAGCA
GTTACAGGCTAACCCGGCGAAAATCGCCAGCCGTAAAGCCTCACAAAATGCGATCGAAGCCTTTGGTAAAATCCTGCCAG
AATATCTGGGCGGTTCGGCTGATCTGGCACCCAGTAACCTCACCATCTGGTCTGGCTCTAAGCCCATCAATGAAGACGCT
GCCGGTAACTATATTCATTACGGCGTGCGTGAATTCGGTATGACCGCGATTGCCAACGGTCTGGCGCTGCATGGCGGCTT
CCTTCCTTATACCGCGACCTTCCTGATGTTTGTTGAGTATGCACGTAACGCCGCCCGTATGGCCGCGCTGATGAAAATCC
GTCAGATTATGGTTTATACCCACGACTCAATTGGCCTGGGCGAAGATGGCCCGACGCACCAGCCGGTAGAGCAGATGGCG
AGCCTGCGTACCACACCAAACATGAGCCTGTGGCGTCCGTGTGATCAGGTGGAATCAGCAGTGGCGTGGAAATATGCGAT
TGAGCGTAAAGATGGTCCAAGCGCACTGATCTTCTCTCGTCAGAATCTGGCGCAGCAGGATCGTACCGCAGAGCAGCTGG
CAAACGTGGCCCGCGGCGGTTATGTGCTGAAAGACAGCGCGGGCACGCCAGAGCTGATTCTGATCGCCACCGGTTCAGAA
GTTGAACTGGCTGTGGCTGCGTATCAGAAACTGACCGATGAAGGCCGTAAGGTTCGCGTGGTTTCCATGCCATCAACGGA
TGCGTTCGACAAGCAGTCTGCAGAGTATCGTGAATCTGTCCTGCCGAAGGCCGTTGCCGCTCGCGTTGCTATTGAAGCGG
GTATTGCAGACTATTGGTTCAAATATACCGGCCTGAACGGCGCTATCGTCGGCATGACCACCTTTGGTGAGTCAGCGCCT
GCTGAGAAGCTGTTTGAAGTCTTCGGCTTCACGGTAGACAACGTAGTAGCGAAAGCAAAAGCGTTGCTGGCCTGA

Protein sequence :
MPSRKDLANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRGYLNHNPTNPHWADRDRFVLSNGHGSMLIYSLLHLTGY
DLPISELENFRQLHSKTPGHPEYGYTVGVETTTGPLGQGIANAVGFAIAERTLAAQFNRPGHEIVDHNTWVFMGDGCMME
GISHEVCSLAGTLKLGKLVAFYDDNGISIDGHVDGWFTDDTAKRFEAYGWHVVRGVDGHDADAIAKAIEEAKAVSDKPSL
LMCKTVIGFGSPNKAGTHDSHGAPLGDDEIALTRKQLGWDYPPFVIPSDIYAEWDAKEVGKAKEDAWNTKFAAYASAFPE
LAAEFTRRMSNELPANWQQESQKFIEQLQANPAKIASRKASQNAIEAFGKILPEYLGGSADLAPSNLTIWSGSKPINEDA
AGNYIHYGVREFGMTAIANGLALHGGFLPYTATFLMFVEYARNAARMAALMKIRQIMVYTHDSIGLGEDGPTHQPVEQMA
SLRTTPNMSLWRPCDQVESAVAWKYAIERKDGPSALIFSRQNLAQQDRTAEQLANVARGGYVLKDSAGTPELILIATGSE
VELAVAAYQKLTDEGRKVRVVSMPSTDAFDKQSAEYRESVLPKAVAARVAIEAGIADYWFKYTGLNGAIVGMTTFGESAP
AEKLFEVFGFTVDNVVAKAKALLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 84
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 68