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Name : lysS (PAJ_2402) Accession : YP_005935278.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase LysS Function : - COG functional category : - COG ID : - EC number : - Position : 2901066 - 2902586 bp Length : 1521 bp Strand : - Note : similar to Pantoea sp. At- 9b, lysyl-tRNA synthetase (NCBI: ZP_05731443.1) COG: translation, ribosomal structure and biogenesis subcellular localization as predicted by Psort 2.0: cytoplasmic DNA sequence : ATGTCTGAACAACAACCGCAGAGCGCTGACGTCGCACTTGAGTTAAATAACGAACTGAAAACGCGTCGCGAGAAGCTGAG CGTGCTGCGTGAAAACGGCGTGGCGTTTCCTAACGATTTTCGTCGTGATACCACCTCCGATCGGCTGCATGCCAGCTATG ACGAGAAGAGTAACGAAGAGCTGGAAGACTTAGGCATTGAGGTCAGCGTGGCTGGCCGTATGATGACGCGCCGTATCATG GGCAAGGCGTCTTTCATTACCCTGCAGGACGTGGGCGGCCGCATTCAGCTGTACGTGGCACGTGACGATCTGGCTGAAGG TATCTACAACGAGCAATTCAAAAAGTGGGACCTGGGCGATATCCTCGGCGCACGCGGTAAGCTGTTCAAAACCAAAACCG GCGAATTGTCGATTCACTGCTCAGAGCTGCGCTTGTTAACGAAAGCCCTGCGCCCGCTGCCAGACAAATTTCACGGTCTG GCCGATCAGGAAACGCGCTATCGTCAGCGCTATCTTGATCTGATCGCCAACGATGAATCACGCAACACCTTCAAAATCCG TTCGCAGATCATGGCCGGCATTCGTCAGTTCATGGTTGGACGCGATTTTATGGAAGTGGAAACGCCAATGATGCAGGTGA TCCCGGGCGGAGCTTCAGCGCGTCCGTTTATCACGCATCACAACGCGCTGGATATCGATATGTATCTGCGTATTGCGCCA GAGCTGTATCTGAAACGCCTGGTGGTGGGCGGTTTCGATCGCGTGTTCGAGATCAACCGTAACTTCCGCAACGAGGGGAT TTCGCCTCGTCACAACCCAGAGTTCACCATGATGGAACTCTATATGGCTTATGCGGATTACAAAGACCTGATTGAACTGA CCGAAAGCCTGTTCCGTACGCTGGCGCAGGATATCCTGGGCAGCACGGTTGTGCCTTACGGTGAGCAGGAATTCGATTTT GGTAAGCCGTTTGAAAAACTCACCATGCGTGAAGCGATCAAGAAGTACCGTCCGGAAACCGATCTGGCCGATCTTGACGA TTTCGACAAAGCGGTGGCGATTGCTCAGACCATTGGCATCAAAGTCGAGAAAAGCTGGGGCTTAGGGCGCGTAGTGACCG AAATTTTTGAAGAAACCGCTGAAGCACATCTGATTCAGCCAACCTTCATTACCGAGTATCCGGCTGAAGTGTCGCCGCTG GCCCGTCGCAACGACGAAAATCCTGAGATCACCGATCGCTTTGAGTTCTTTATTGGCGGACGTGAAATCGGCAACGGTTT CTCTGAGCTTAACGATGCGCAGGATCAGGCTGAGCGTTTCCTGCAGCAGGTGAATGCGAAAGATGCGGGCGATGATGAAG CGATGTTCTATGACGAGGATTATGTCACCGCCCTGGAACATGGTTTACCGCCAACGGCAGGCTTAGGCATTGGTATTGAC CGCATGGTCATGCTGTTTACCAACAGCCACACCATCCGCGACGTAATTCTGTTCCCGGCGTTGCGCCCAGGCTCAAAGTA A Protein sequence : MSEQQPQSADVALELNNELKTRREKLSVLRENGVAFPNDFRRDTTSDRLHASYDEKSNEELEDLGIEVSVAGRMMTRRIM GKASFITLQDVGGRIQLYVARDDLAEGIYNEQFKKWDLGDILGARGKLFKTKTGELSIHCSELRLLTKALRPLPDKFHGL ADQETRYRQRYLDLIANDESRNTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP ELYLKRLVVGGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGSTVVPYGEQEFDF GKPFEKLTMREAIKKYRPETDLADLDDFDKAVAIAQTIGIKVEKSWGLGRVVTEIFEETAEAHLIQPTFITEYPAEVSPL ARRNDENPEITDRFEFFIGGREIGNGFSELNDAQDQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPALRPGSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-169 | 69 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005935278.1 | lysyl-tRNA synthetase LysS | VFG1668 | Protein | 3e-169 | 69 |
