Gene Information

Name : garL (PAJ_2357)
Accession : YP_005935233.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : 2-dehydro-3-deoxyglucarate aldolase GarL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2848996 - 2849766 bp
Length : 771 bp
Strand : -
Note : similar to Pantoea sp. At-9b, 2-dehydro-3-deoxyglucarate aldolase (NCBI: ZP_05732158.1) COG: carbohydrate transport and metabolism subcellular localization as predicted by Psort 2.0: unknown

DNA sequence :
ATGAGTAATACAGCCTGGCCAAATGAATTCCGTCGCCGCCTGCTGGCAGGTGAAACCCTGATCGGCAGTTGGTGCGCCCT
GGCAAGTCCTGTTTCGACCGAGGTGTTAGGGCTGGCCGGATTTGACTGGTTAGTTCTGGATGGCGAGCACGCACCGAACG
ATATCACCACGTTTGTTCCCCAGCTAATGGCGCTGAAGGGCAGCCGCAGCGCGCCGGTGGTGCGTCCACCCTGTAATGAA
CCGGTCATCATTAAGCGCCTGCTGGATATTGGTTTTAATAACATCCTTGTTCCCTTCGTCGAGAACGAAGACGAAGCCAG
ACGTGCAGTTGCCTCCACGCGCTATCCGCCTACCGGAATTCGCGGCGTGTCGGTTTCCCATCGCAGCAACATGTACGGCA
CGGTGCCGAATTATAACGCCACCATCAACGACAACATTTCGGTGCTGGTCCAAATAGAAACCCAGCAGGCTGTCGACAAC
ATTGACGCCATCGCCGCCGTTGACGGCGTGGACGGCATTTTTGTCGGGCCGGGCGATCTCTCTGCCGCACTCGGCTATCT
CGGGCAGCCGGCCCATCCGGAGGTGTTAACGGTCATCAAACACATCTTTGAGCGGGCAAAAGCCGCCAACAAGCCCAGCG
GCATTCTGGCACCGGTGGAAGCCGATGCCCGTCGCTATCTCGAATGGGGCGCAACCTTTGTTGCCGTTGGCAGCGATCTC
GGTGTTTTCCGCAGTGCCACGCAGGCGTTGTGCGACAAATTTAAAAAGTAA

Protein sequence :
MSNTAWPNEFRRRLLAGETLIGSWCALASPVSTEVLGLAGFDWLVLDGEHAPNDITTFVPQLMALKGSRSAPVVRPPCNE
PVIIKRLLDIGFNNILVPFVENEDEARRAVASTRYPPTGIRGVSVSHRSNMYGTVPNYNATINDNISVLVQIETQQAVDN
IDAIAAVDGVDGIFVGPGDLSAALGYLGQPAHPEVLTVIKHIFERAKAANKPSGILAPVEADARRYLEWGATFVAVGSDL
GVFRSATQALCDKFKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaI AAO17185.1 HpaI Not tested tcd island Protein 7e-44 47