Gene Information

Name : PAJ_2203 (PAJ_2203)
Accession : YP_005935079.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2663182 - 2664453 bp
Length : 1272 bp
Strand : +
Note : similar to Escherichia coli B7A (NCBI:ZP_03028903.1)

DNA sequence : 
ATGGGACCCACTAAGAAGTGTCCAAAAACCGAGGGTCCCAAAATGGCAAAAATCGCTAAGAAGCTCACTGACACTGAAAT
CAAAAGCATCAAGCCAGCCGACAAAGAGATCAACTTGTTTGACGGTGATGGTTTAATACTACGAATCGCTCCCCTGGCGA
AGGGATGGAAGAAAAATTGGTATTTCAGATATGCAGTGCCGGTGAGTAAGAAAAGAACCAAAATGAGCCTTGGGACCTAC
CCCCACCTTACACTGGCAAGAGCCAGAGCCTTACGAGATGAATACCTTTCCTTGCTTGCCAATGGCATTGATCCCCAGGT
CCATAACAGCGATAAAGCTAATGCCTTAAAGAATGCTACTGAACACACTTTCCAAGCCGTGGCTAGGAAATGGTTAGATG
ATAAGGTAAAGACCTCAGGTATCTCGAAAGACCATGCAGAAGACATCTGGAGAAGCCTAGAGAGAAATATTTTTCCCGGC
TTGGGTAATGTTCCTATCAATGAGATCCGGCCTAAACTATTAAAGCAACATCTTGACCCTATTGAGCAACGAGGAGTCCT
TGAAACTTTACGGCGAATCATTTCCCGATTAAATGAAATTTTCCGCTATGCAGCAACTGAGGAACTTATCGAATTTAATC
CTGCTGACAATCTTGCCCAGAGATTTAGTAAGACGAAGAAACAGAACATGCCAGCCCTGCCCCCAAGTGAACTGCCCCGC
TTCCTAATGGTGTTAAACAATGCCTCAGTTCGTTTGGAGACAAGATTGCTGATTGAATGGCAATTGCTGACCTGGGTTCG
TCCAGGGGAAGCCGTTCGTGCGAGATGGGCTGATATAGATACTGACAACTCAATGTGGAACATCCCGGCTGAGTTTATGA
AAATGAAGAAGCCTCACAAAGTTTCACTAAGCAAAGAAGCTTTGAGAGTCCTAGAGACAATGAAAGCGATAAGTGGGCAT
CGTGAATGGGTGTTTCCAAGCATAAAGGCTCCTCTTAACCATATGCATGAACAAACAGCTAATGCGGCCATAATCCGTAT
GGACTTCGGAGGTGAGCTTGTAGCCCATGGAATGAGATCTATTGCACGAACGGCCGCAGAGGAGTCGGATAAGTTCAGGA
CTGATGTCTTAGAAGCGGCCCTTGCTCACTCGAAGAAAGATGAAATAATTGCCGCATATAATCGCGCAGAGTATCTCGCA
GAACGAGTGGTTCTCATGCAGTGGTGGAGTGGCTATGTACAAGCTCAAAGGCTAAAAGCTATTGCAGCCTAA

Protein sequence : 
MGPTKKCPKTEGPKMAKIAKKLTDTEIKSIKPADKEINLFDGDGLILRIAPLAKGWKKNWYFRYAVPVSKKRTKMSLGTY
PHLTLARARALRDEYLSLLANGIDPQVHNSDKANALKNATEHTFQAVARKWLDDKVKTSGISKDHAEDIWRSLERNIFPG
LGNVPINEIRPKLLKQHLDPIEQRGVLETLRRIISRLNEIFRYAATEELIEFNPADNLAQRFSKTKKQNMPALPPSELPR
FLMVLNNASVRLETRLLIEWQLLTWVRPGEAVRARWADIDTDNSMWNIPAEFMKMKKPHKVSLSKEALRVLETMKAISGH
REWVFPSIKAPLNHMHEQTANAAIIRMDFGGELVAHGMRSIARTAAEESDKFRTDVLEAALAHSKKDEIIAAYNRAEYLA
ERVVLMQWWSGYVQAQRLKAIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAK20773.1 integrase Not tested VPI Protein 4e-81 45
int AAK20803.1 integrase Not tested VPI Protein 4e-81 45
unnamed AAA82714.1 integrase Not tested VPI Protein 4e-81 45
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 5e-81 45
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 5e-81 45
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 2e-78 43
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 1e-65 41
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 1e-65 41
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 7e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAJ_2203 YP_005935079.1 phage integrase family protein VFG1092 Protein 5e-66 41