|
Name : papD (PAJ_2012) Accession : YP_005934888.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Virulence Product : fimbrial chaperone protein PapD precursor Function : - COG functional category : - COG ID : - EC number : - Position : 2439310 - 2440059 bp Length : 750 bp Strand : - Note : similar to Serratia entomophila, SefD (NCBI: NP_938128.1) COG: cell motility and chemotaxis subcellular localization as predicted by Psort 2.0: periplasmic DNA sequence : ATGATGAAAAGACGCAAGGATAGGTGGGCATTACTGTTGATAACGAGTGTGCTGGCGACGTTGGCAGGGCAAACAGCGCA GGCCGCCATTGCCCTTGATCGCACGCGCGCCATTTTTAACGGAGGCGAAAAAAATCTCATCCTGAATATCAGCAACGACA ATCAGAAAGAGCCCTATCTGGCTCAGGCCTGGCTGGAAGATGCACAGGGCAATAAGCTCACCAACTATCTCAGGGTCACG CCGCCCGTGCAGCGCGTGGAGCCGGGCGCAAAGAGCGTCATTCGCATTACCGCGTTGCCCTCTTCCGCCTCGCTGCCGCA GGACAGGGAAAGTGTGTTTTATTTCAGCGTCCGGGAAATTCCGCCGCGCAGTGACCGCGCCAACGTGTTGCAACTGGCCC TGCAGACCCGAATCAAACTGTTCTATCGACCAGCCAGCATCACCCCTGAGCGCTTCAGCCGCCATGATGATCAGTTAGTC CTGCACAAAGTGAAAGGCGGTTTCCGCGTGGAGAACCCAACACCTTATTACATGACGTTGCTGGGGATCATCAGTAAAGG CAACCGTGCTGTTGAGAAAAGCTTTGTGCCCGTCATGATCGCCCCGATGTCGAGCGAGACGGTGAAGTCCTCGGTTTCCC GCGATCCGCAAATTATCACCATTAATGATTTTGGTGGAAAACCTGTTCTGCCCTTTCTCTGCCAGGGCTCGGTATGTCGG GCCGATCCCGTGGCCGTCACTCAGCACTGA Protein sequence : MMKRRKDRWALLLITSVLATLAGQTAQAAIALDRTRAIFNGGEKNLILNISNDNQKEPYLAQAWLEDAQGNKLTNYLRVT PPVQRVEPGAKSVIRITALPSSASLPQDRESVFYFSVREIPPRSDRANVLQLALQTRIKLFYRPASITPERFSRHDDQLV LHKVKGGFRVENPTPYYMTLLGIISKGNRAVEKSFVPVMIAPMSSETVKSSVSRDPQIITINDFGGKPVLPFLCQGSVCR ADPVAVTQH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 3e-56 | 58 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 9e-57 | 57 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 8e-57 | 57 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 1e-56 | 57 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 1e-56 | 56 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 1e-56 | 56 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 1e-56 | 56 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 5e-51 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| papD | YP_005934888.1 | fimbrial chaperone protein PapD precursor | VFG1547 | Protein | 5e-57 | 57 |
| papD | YP_005934888.1 | fimbrial chaperone protein PapD precursor | VFG0896 | Protein | 6e-57 | 56 |
| papD | YP_005934888.1 | fimbrial chaperone protein PapD precursor | VFG0885 | Protein | 2e-51 | 55 |
