Gene Information

Name : yfcI (PAJ_1848)
Accession : YP_005934724.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : transposase YfcI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2233857 - 2234750 bp
Length : 894 bp
Strand : +
Note : similar to Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29, conserved hypothetical protein (NCBI: ZP_03223747.1) COG: general function prediction only subcellular localization as predicted by Psort 2.0: unknown

DNA sequence :
ATGAAGATAAAAACCACCACGCCAACGCCTCACGATGCCCTGTTCAGGCAGTTTCTGACACAGCCCGATATTGCGCGGGA
TTTTATGGCGATCCACCTGCCAGAACCGTTACGAGCCTTTTGCGACCTGTCCACCCTTAAACTGGAATCGGGTTCGTTTG
TCGAAGACGATCTGCGTCAGTATTTCAGCGACGTGCTCTACAGCCTTAAAACCGCATCCGGGGAAGGCTACATCCACGTG
CTTATCGAGCATCAGTCCGGTCCGGATCAACATATGGCCTTCAGGTTGATGCGCTATGCGGTTGCCGCCATGCACCGCCA
CCTGCAGGCCGGGCATAAAACACTGCCGTTGGTTATCCCAATGTTGTTCTATACCGGTAAACGCAGCCCGTATCCTTATT
CCCTCTGCTGGCTCGATGAATTTGCCCGACCGGACATCGCGGGCGCACTGTACACCACGGCTTTCCCTTTGGTTGATGTG
ACGATTATCCCTGACGAGGAGATTGCACACCATCGCAGCATGGCCGCCTTAACCTTACTGCAAAAGCATATCCACCAGCG
AAACCTGACAGCCCTGATTGACAGCCTGGTCAGTCTTCTTCTACATAAACATCTCTCTTCATCGCTGGTGATATCGCTGG
TAAACTACATGATACAGGTGGGCGAAGCTTCAGATGCGCAAACCTTTGTTCATAAGCTGGCACAGCGGGTGCCGCAACAC
GGAGAGGCTCTGATGACCATTGCAGAACAGCTGGAACAAAAAGGCATTGAAAAAGGCAGGAAGGAAGAAGCGCTGAAGAT
TGCCCGGACCATGTTAAATAACGGCCTTGATCGCCCGACCGTGATTAAAATGACCGGCCTGACAGAAGACGAATTGGCGA
AACTCCGCCACTGA

Protein sequence :
MKIKTTTPTPHDALFRQFLTQPDIARDFMAIHLPEPLRAFCDLSTLKLESGSFVEDDLRQYFSDVLYSLKTASGEGYIHV
LIEHQSGPDQHMAFRLMRYAVAAMHRHLQAGHKTLPLVIPMLFYTGKRSPYPYSLCWLDEFARPDIAGALYTTAFPLVDV
TIIPDEEIAHHRSMAALTLLQKHIHQRNLTALIDSLVSLLLHKHLSSSLVISLVNYMIQVGEASDAQTFVHKLAQRVPQH
GEALMTIAEQLEQKGIEKGRKEEALKIARTMLNNGLDRPTVIKMTGLTEDELAKLRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3497 YP_001007658.1 putative transposase Not tested YAPI Protein 1e-84 57
pilW CAF28495.1 putative transposase Not tested YAPI Protein 2e-85 57
YpsIP31758_3726 YP_001402680.1 transposase Not tested YAPI Protein 1e-84 56
tnp AAN64216.1 transposase Not tested necrotizing factor locus Protein 6e-75 49
PMI2627 YP_002152329.1 transposase Not tested Not named Protein 2e-61 48