Gene Information

Name : PAJ_1743 (PAJ_1743)
Accession : YP_005934619.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2108720 - 2109202 bp
Length : 483 bp
Strand : -
Note : similar to Pantoea sp. At-9b, type VI secretion system effector, Hcp1 family (NCBI: ZP_05731830.1) COG: general function prediction only subcellular localization as predicted by Psort 2.0: extracellular

DNA sequence :
ATGGCTATTGATATCTTTTTGAAAATAGATGGAATTGAAGGTGAGTCGCAAAATGCAAACCATAAAAAATGGATAGATGT
TCTGTCATTTAACTGGGGCGCGCAGCAACCAGGTAATATGTCCGTTGGCGGTGGTGGCGGTGCGGGAAAAGTGAATTATC
GCGATTTAAGTGTTGAGGCATTGATCGATAAGGCCACACCGGCGTTAGTGAAATATTGTGCCAGTGGTAAGCATCTGCCA
AAAATTCAGCTGTCTGTTTGCAAGGCAGGCGGGCAGGAAGTGGAATATACTCGCATCACGCTTGAAGATGTGCTGGTTAC
GCAGACTGACTTTACCGGCATTGGTCACGCGTCCACGCTGGGTATGCAGTATTCCTTTCAAGCCAGCAAGGTTGCGCTGG
AATACTGGGAACAGGCTTCTCAGGGAACGAAAGCCGCTTCTGTGCAGATGGGTTGGGATATCAAGCAAAATAAAGAAAGC
TAA

Protein sequence :
MAIDIFLKIDGIEGESQNANHKKWIDVLSFNWGAQQPGNMSVGGGGGAGKVNYRDLSVEALIDKATPALVKYCASGKHLP
KIQLSVCKAGGQEVEYTRITLEDVLVTQTDFTGIGHASTLGMQYSFQASKVALEYWEQASQGTKAASVQMGWDIKQNKES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0302 NP_454882.1 conserved hypothetical protein Not tested SPI-6 Protein 8e-22 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAJ_1743 YP_005934619.1 hypothetical protein VFG2071 Protein 4e-19 45