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Name : gabD (PAJ_1718) Accession : YP_005934594.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NADP+] GabD Function : - COG functional category : - COG ID : - EC number : - Position : 2075801 - 2077258 bp Length : 1458 bp Strand : - Note : similar to Pantoea sp. At-9b, succinic semialdehyde dehydrogenase (NCBI: ZP_05732551.1) COG: energy production and conversion subcellular localization as predicted by Psort 2.0: cytoplasmic DNA sequence : ATGTCACGTATACAACTAAAAGATCACACGCTGTTGCGTCAGCAGGCGCTGTTTGCGGGTCAATGGCAGAACGGTTATCA GGGCGAAACGCTGCCGGTTATCGATCCGGCAACCGGTGAGACGCTGGCGACGGTTCCGGCGCTGGGGCTGAAGGAAACCG AGGCGGCGATCGATCATGCGGAGTCGGTACGCCATGACTGGGCTAAAACACCCAACGCCACACGCGCCGCACTGCTGGAA AAGTGGTATCAGTTGATTATCGATAACGCCGACGATCTTGCCATCATCATGACGGCCGAGCAGGGCAAACCGCTGGCGGA AGCCAGAGGCGAAGTCCTTTACGGAGCCAGTTTCGTTAAGTGGTTTGCCGAAGAGGCGCGTCGCATTTACGGCGATACCA TTCCCGCGCCCACGTCCGACCGCAGAATCATCGTGTTAAAACAGCCGGTCGGCGTAGCGGCAGCCATTACGCCGTGGAAT TTTCCCATTGCCATGATTACCCGCAAGGTGGCGCCTGCGCTGGCGGCGGGTTGTCCGATTATCGTTAAACCTTCTGACCT GACGCCGCTGTCTGCCCTGGCGCTGGCGGTTCTGGCAGAGCGCGCCGGCTTTCCGTCCGGTGTTTTGCAGGTGGTCACCG GTATGCCGACGGAAATTGGCGCCGCACTGACCGAAAGCCGCCTGGTGCGTAAAATTTCATTCACCGGCTCAACCCGTGTG GGTCAGTTACTGATGAAACAATGTGCCGACAGCGTAAAACGGTTGAGTCTGGAACTGGGCGGCAACGCGCCGTTAATCGT TTTCGATGACGCCGATATTGAGATCGCGGTGGCTGGCGTCATGACCAGCAAATTCCGTAACGCCGGGCAAACCTGTGTCT GCGCCAACCGGATTCTGGTACAGCGCAACATCTATGAACGCTTTTCCGCCCGCTTACTGGAAGCCGTGGCCACCCTCAAG GTGGGCGACGGATTTGCGGCCGGTAGCACCCTCGGGCCCCTGATCAATACCGCCGCGGTTGAAAAGGTCAATGCACATAT CGACGATGCCTTACAGAAAGGGGCGACGCTGTTAACGGGCGGCATCAGCAGCGGAGCGGGAACCTGGGTTCAGCCTACCG TTCTGGGGCAGGTGACGAGTGAGATGCGCATTGCGCAGGAAGAGACCTTTGGCCCGGTGGCACCACTGTTTGTGTTTGAC GATGAGGCGCAGGCATTGGCGATGGCGAACGACACGCCTTATGGCCTGGGCGCGTATTTCTTCACGGAGAATATTCGACG CGCCTGGCGGGTAGCGGAAGCGCTGGAATTTGGCATGGTAGGATTTAATACGGGCGTAATCTCTTTAGAAGTGGCGCCCT TTGGCGGCGTTAAATTATCGGGAATCGGTCGTGAAGGTTCACGTTACGGAATTGATGAATATCTGGAACAAAAAACATTC CATCTCGGCAGTTTGTAA Protein sequence : MSRIQLKDHTLLRQQALFAGQWQNGYQGETLPVIDPATGETLATVPALGLKETEAAIDHAESVRHDWAKTPNATRAALLE KWYQLIIDNADDLAIIMTAEQGKPLAEARGEVLYGASFVKWFAEEARRIYGDTIPAPTSDRRIIVLKQPVGVAAAITPWN FPIAMITRKVAPALAAGCPIIVKPSDLTPLSALALAVLAERAGFPSGVLQVVTGMPTEIGAALTESRLVRKISFTGSTRV GQLLMKQCADSVKRLSLELGGNAPLIVFDDADIEIAVAGVMTSKFRNAGQTCVCANRILVQRNIYERFSARLLEAVATLK VGDGFAAGSTLGPLINTAAVEKVNAHIDDALQKGATLLTGGISSGAGTWVQPTVLGQVTSEMRIAQEETFGPVAPLFVFD DEAQALAMANDTPYGLGAYFFTENIRRAWRVAEALEFGMVGFNTGVISLEVAPFGGVKLSGIGREGSRYGIDEYLEQKTF HLGSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-130 | 59 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 9e-87 | 45 |
