Gene Information

Name : ycdL (PAJ_1702)
Accession : YP_005934578.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : isochorismatase family protein YcdL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2055743 - 2056432 bp
Length : 690 bp
Strand : -
Note : similar to Bradyrhizobium sp. BTAi1, putative isochorismatase family protein (NCBI: YP_001240557.1) COG: secondary metabolites biosynthesis, transport and catabolism subcellular localization as predicted by Psort 2.0: unknown

DNA sequence :
ATGCCTGAGTACAGTGTGAATTCCACCCCTTATGCCTGGCCGTTTGATGGCCATTTTAGTCCGGCCGACACGGCTCTCCT
CGTCATTGATATGCAAACCGATTTTTGCGGCCCGGGGGGGTACGTTGACAGGATGGGCTACGACATTGGCCTGACGCGTG
CGCCTGTCGAACCCCTTAAAGTGTTACTGGCACGTATGCGGGCGCTTCAGTTTCCCATCATTCACACCCGGGAAGGGCAT
CGCGCGGACCTGAGTGACTTACCGGCAAACAAGCGCTGGCGTTCGGCCAGGATGCAGGCGGAGATCGGCAGTGCAGGGCC
GTGCGGCCGTATCCTGGTGCGCGGTGAGCCGGGCTGGGAGATTATCCCCGAGCTCGCCCCCTTAGCAGGAGAAGTGATCA
TTGATAAGCCCGGTAAAGGATCCTTTTATGCCACAGACCTTGAGCTGGTCTTACGCAGTCGCGGCATTCGGAATTTAATT
ATTACCGGTATCACGACGGATGTATGTGTTCATACGACGCTGAGAGAGGCCAACGATCGCGGATATGAGTGCCTGGTTTT
GTCCGACTGTTGTGCCGCCACAGAGCAACGCCATCATGAAGCCGCGCTGAGCATGATCCACATGCAGGGCGGCATCTTTG
GTGCCGTTGCCACCTCTGCCGCGCTGCTGGACACGCTCGGTCAGCCTTAA

Protein sequence :
MPEYSVNSTPYAWPFDGHFSPADTALLVIDMQTDFCGPGGYVDRMGYDIGLTRAPVEPLKVLLARMRALQFPIIHTREGH
RADLSDLPANKRWRSARMQAEIGSAGPCGRILVRGEPGWEIIPELAPLAGEVIIDKPGKGSFYATDLELVLRSRGIRNLI
ITGITTDVCVHTTLREANDRGYECLVLSDCCAATEQRHHEAALSMIHMQGGIFGAVATSAALLDTLGQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2632 YP_859426.1 isochorismatase hydrolase Not tested Not named Protein 1e-41 53