Gene Information

Name : PAJ_1658 (PAJ_1658)
Accession : YP_005934534.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2005972 - 2007849 bp
Length : 1878 bp
Strand : -
Note : similar to Pantoea sp. At-9b, type VI secretion protein, VC_A0110 family (NCBI: ZP_05728964.1) COG: unknown function subcellular localization as predicted by Psort 2.0: unknown

DNA sequence :
ATGGACAGCAAGCTGCTTGATTACTACAACCGTGAACTGGCCTATCTGCGCGAGATGGGCGCGGAGTTTGCTGCCCAGTA
TCCCAAGGTCGCCGGGCGGCTTGGTATGCGCGGCATTGACGTCGCCGATCCTTACGTCGAAAGACTTATGGAGGGTTTCG
CGTTTCTGACGTCACGCGTGCAGTTAAAGATGGATGCCGAGTTTCCACGCTTTTCTCAGCGGATGCTGGAAATGGTGGCA
CCGGGCTACCTTTCACCTACGCCGTCGATGGCCATCGCCCAGCTCACGCCGGACAGCCGCAAAGGCGATATCAGCAACGG
TTTCTTAGTGCCGCGCGGCACAATGATGGAAAGCCAGAACCTGAAAAAAACGGGCGTCACCTGCAGCTATACCACCGCGC
ACGATGTGATGTTACAGCCCCTGCGTATCAGCGATGTGTCGTTAGGTGGCGTGCCAGCGGATATCCCGTTAGGCGAGTTG
AAAGCGGGCGGCTCGACGGCGGCGTCCAGCGCCCTCCGTATCCGCATCACCTGCGAAGGCATTTCATCGTTAAGCCAGCT
CAGTCTCGATGACGTGATGTTTTTCCTGAGCGGACCCGACATCCAGGCCCTGAAACTGATGGAGCTGCTGATGCAGCATC
GTGTCGGAATCATCCTGCAGTCCGTGGAAGCAAAACCGCAACGTCAGGTTCTGCCGGATGACGCGCTTCAACAGGAAGGC
TTTTCGACCGAGCAGGCCCTGCTGCCCGACGATCTGCGTAATTTTGACGGCTACCGCCTGCTGCAGGAGTATTTTGCATT
CCCGGCACGCTTCCAGTTTATCAGCCTGCGTCAGCTGGCGCCTTTCCTGCAGCGCTGCGATAACGCCCTGTCGTTTGACA
TCGTCATCCTGCTGGATAAGGCCGATGCGGCGCTGGAAAGCGTTGTCGACAGCGCCCATCTGGCCCTGCACTGCACGCCG
GTCATTAACCTGTTCCCGAAAACCGCCGAGCGGCTTAAGGTCAGTGACAGTCAGCACGAGTATCACCTGGTGGTCGATAA
CATTCGTCCGCTGGACTATGAGATCCATTCGGTGAAGCGCTTGTTCGCCTCTGTCGAAGGGCAGCGCGAAGAGCAGATCT
TCCGGCCGTTCTGGAGCACCTTCAGCCATGACGGCGGGGATTATGGCGCGTATTTCTCCCTGCGTCGTGAACAGCGCACG
CTCTCTGAGCACGCGTTGCGCTATGGCACCCGAACGGGCTATATCGGTTCTGAAGTGTTTCTCTCCCTGGTGGATCAAAA
TCATACACCGTGGAACAGCGATATCCGCTACTTGTCTGCGGAAGTGATGTGCACCAGCCGTGACCTGCCTTTGATGCTGC
TACAGCAAGAGCAGGCCAACTTTGTGATGCCGGATTCCATCCCTGTCGGGCAACTTAAATTGTGCAAAGGCCCGACGCCA
CCGCGTCCGGCGCTGGCTGAAGGGCTTTCAGCATGGCGACTCATCAGTCATCTGCAGATGAACTATCTAAGCCTGATGGA
CAGCAGCGATGGCGAAGGGGCTGCGGCACTGCGCCAGATGCTGAGCCTGTACGCCAGCCTGGCCGAAACGCCGCTAACGC
GTCAGATTGACGGAATTCGGCACTGCAACCTCAAAGCCGTTCACCGTCGGGTGCCCGAGCCGGGCCCCGTGGTGTTTGCG
CGCGGGGTTAGCATTGCGCTTGAGGTGGATGAGCAGGCGTTTTCAGGTGCCAGCCCCTGGCTGTTCGGCAGCGTGCTGGA
GCGGGTCTTTTCTCGCCTTGTGGCGCTTAACAGCTTTACCGAATTCACCCTGAGCAGCCAGCAGCGCGGCGAAGTGGGCT
ACTGGCCGCCGCGCATGGGCAAAAAGGCGCTGCTATGA

Protein sequence :
MDSKLLDYYNRELAYLREMGAEFAAQYPKVAGRLGMRGIDVADPYVERLMEGFAFLTSRVQLKMDAEFPRFSQRMLEMVA
PGYLSPTPSMAIAQLTPDSRKGDISNGFLVPRGTMMESQNLKKTGVTCSYTTAHDVMLQPLRISDVSLGGVPADIPLGEL
KAGGSTAASSALRIRITCEGISSLSQLSLDDVMFFLSGPDIQALKLMELLMQHRVGIILQSVEAKPQRQVLPDDALQQEG
FSTEQALLPDDLRNFDGYRLLQEYFAFPARFQFISLRQLAPFLQRCDNALSFDIVILLDKADAALESVVDSAHLALHCTP
VINLFPKTAERLKVSDSQHEYHLVVDNIRPLDYEIHSVKRLFASVEGQREEQIFRPFWSTFSHDGGDYGAYFSLRREQRT
LSEHALRYGTRTGYIGSEVFLSLVDQNHTPWNSDIRYLSAEVMCTSRDLPLMLLQQEQANFVMPDSIPVGQLKLCKGPTP
PRPALAEGLSAWRLISHLQMNYLSLMDSSDGEGAAALRQMLSLYASLAETPLTRQIDGIRHCNLKAVHRRVPEPGPVVFA
RGVSIALEVDEQAFSGASPWLFGSVLERVFSRLVALNSFTEFTLSSQQRGEVGYWPPRMGKKALL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 2e-122 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAJ_1658 YP_005934534.1 hypothetical protein VFG2074 Protein 1e-132 45