|
Name : clpV (PAJ_1656) Accession : YP_005934532.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 2002263 - 2004872 bp Length : 2610 bp Strand : - Note : similar to Pectobacterium wasabiae WPP163, type VI secretion ATPase, ClpV1 family (NCBI: YP_003259817.1) COG: posttranslational modification, protein turnover, chaperones subcellular localization as predicted by Psort 2.0: cytoplasmic DNA sequence : ATGTCAGAGATCAGCCGTGCCGTGCTATTCGGCAAACTGGATACGCTGTTATTTACCTCGCTTGAGAGTGCGACCGCCTT TTGTAAACTGCGTGGCAACCCCTATGTTGAACTGGTGCACTGGTTGCATCAGCTCATGCAGCAGCAGGATGGCGATCTTC AGCAGGTGATTAAGCATTTTTCACTGGATGAAAACGCGCTGACGCGGGATATCGTCGCTGCACTGGACCGCCTGCCGCGC GGTGCGGGTGCGGTGTCCGATCTCGCAGAACACATCGACAGCGCCGTTGAGCGCGCCTGGGTTTATGCATCACTCAAATA CGGTGCTACCCGTATTCGCGGTGGTCACCTGCTGATAGGTATGCTGAAGACCTTTACGCTCGCCAGCGTCCTGAAAGGCA TTTCACCCCAGTTTTCACGCGTGAACGCCGATGCTTTACTGGAGCAGTTCGATACCTTGCTGGCGAACAGTAAAGAAGTT CAGCAGGCGCTGGTTCAGCCCGCAGGCGATGCTGCCGCCCCTCCGGCGGCGGGCGACAGCACGTTAGCGCAGTATGCGCA GGATCTGACCGCGCGAGCGCGCGACGGAAAAATCGACCCGGTTGCGGGCCGTGATGAAGAGATCCGCCAGATGGTGGATA TCCTGATGCGCCGTCGCCAGAACAACCCGTTACTCACCGGTGAAGCTGGCGTGGGTAAAACGGCGGTGGTAGAAGGGCTG GCGCTGCGCATTGCCGCCGGTGATGTACCGGCACCGCTTCGTGACGTGCAACTGTGGCTGCTGGATATTGGCATGTTGCA GGCAGGCGCCGGCATGAAAGGCGAATTCGAAGCGCGTTTACAGGCCCTGATTAACGAAGTGCAATCCAGCCCTACGCCGA TTGTGTTATTCATTGATGAAATTCATACCCTGGTCGGTGCAGGCGGTCAGCAGGGCACAGGCGATGCCGCCAACCTGTTA AAGCCGGCCCTGGCGCGCGGACAGTTGCGCACGATTGGCGCAACGACCTGGGCGGAATACAAGAAATACATCGAAAAAGA TCCTGCATTGACCCGCCGCTTCCAGACCGTTCAGGTGCAGGAGCCGGATGAAGCAAAAGCGATCCTGATGCTGCGCAGCA CCGTGAGCGCGCTGGAAAAACACCATCAGGTGCTGTTACTGGATGAAGCCGTCAGTGCCGCCGTTAAGCTCTCTCACCGT TACATTCCTGCCCGCCAGCTGCCGGATAAAGCCGTAGCCTTACTGGATACCGCCTGTGCACGCGTTGCCGTCAGCCAGGG CGCACAGCCTGCCGCGCTGGAAGACTGCCTGCACCGTCTGGCCGCGCTGGAAATCGAAGCGGAGATCGCCGAACGTGAAG CCAAAGTGGGGCTGGGTGATGAAACCCGCCAGGCCACTATTGCCGCCCAGCGCGCTGCCCTGGAAGCAGAGCGCGATGCG CTGGACGCCCGCTGGCAGCAGGAGCGTGAGCTGGTCGAACAGCTGATTGCCCTGCGCGCGCGTTGCGTAACCGAAGGCGA CACTTCCCTGCGCGAGCAGCTCGATGAAACCCGACAGAAGTTGCATGCGGTTCAGGGTGAAGCCCCGTTACTGTTTGCTG CCGTTGATGCCAGCGTCGTTGCCGCAGTGGTATCCGACTGGACCGGCATTCCGCTGGGCCGGATGGTGAAAAACGAAATT GACGCCGTGCTTAACCTCGCGGACACGCTGAATCAGCGCGTAATTGGGCAGCGTCACGGGCTGGATCTGATTGCCAAACG CGTTCGCACCTCACGCGCCCGACTGGACAATCCCAATAAACCGGTCGGTGTGTTTATGCTCTGTGGCCCGTCAGGCGTCG GGAAAACCGAAACCGCGCTGGCGCTGGCCGAATCGCTTTATGGTGGAGAGCAAAACATCATCACCATCAACATGAGCGAG TTCCAGGAAGCGCACACCGTTTCAACGCTGAAAGGTGCGCCTCCAGGCTATGTAGGTTACGGTGAAGGCGGTGTGCTGAC GGAGGCCGTGCGTCGTCGTCCTTACAGCGTCGTGCTGCTGGATGAGATTGAGAAAGCGCATCCTGATGTGCATGAGCTGT TTTTCCAGGTGTTCGACAAAGGCTGGATGGAAGATGGAGAAGGGCGCCACATTGATTTCCGCAATACCATTATCATCCTC ACCTCTAACGTCGGTACGCAACTGATCAGTGCGCTCTGTGCCGATCCGGAACTCATGCCGGATCCTGACGCGCTCAGCAC CGCTTTACGTAAACCCTTACTGGAGGTGTTCCCGCCTGCACTGCTGGGCCGTCTGCTGGTGGTGCCTTACTATCCCCTCA GTGACGAGATGCTGGCAGAGATTGTTAAGCTGCAACTGGGGCGCATTGTTCGCCGCCTGGAAGAGAACCACGGTATTGAA GCCATTATTGACGATTCGGTCGTCAGCCAGATCGTGCAGCGTTGTACGGAAGTGGAGTCTGGAGGTCGCATGGTCGATGC CATCCTGACAAATACCCTGTTGCCGCAGATGAGCCAGATACTGCTCAGCGCCCATGCTCGTGATGAACGTTATCGTCGCG TGCAGGTCAGCTGTGATCAGGGCGAGTTTGTTTGCCAGTTTGCTGTCTAA Protein sequence : MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQQDGDLQQVIKHFSLDENALTRDIVAALDRLPR GAGAVSDLAEHIDSAVERAWVYASLKYGATRIRGGHLLIGMLKTFTLASVLKGISPQFSRVNADALLEQFDTLLANSKEV QQALVQPAGDAAAPPAAGDSTLAQYAQDLTARARDGKIDPVAGRDEEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGL ALRIAAGDVPAPLRDVQLWLLDIGMLQAGAGMKGEFEARLQALINEVQSSPTPIVLFIDEIHTLVGAGGQQGTGDAANLL KPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVQEPDEAKAILMLRSTVSALEKHHQVLLLDEAVSAAVKLSHR YIPARQLPDKAVALLDTACARVAVSQGAQPAALEDCLHRLAALEIEAEIAEREAKVGLGDETRQATIAAQRAALEAERDA LDARWQQERELVEQLIALRARCVTEGDTSLREQLDETRQKLHAVQGEAPLLFAAVDASVVAAVVSDWTGIPLGRMVKNEI DAVLNLADTLNQRVIGQRHGLDLIAKRVRTSRARLDNPNKPVGVFMLCGPSGVGKTETALALAESLYGGEQNIITINMSE FQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHELFFQVFDKGWMEDGEGRHIDFRNTIIIL TSNVGTQLISALCADPELMPDPDALSTALRKPLLEVFPPALLGRLLVVPYYPLSDEMLAEIVKLQLGRIVRRLEENHGIE AIIDDSVVSQIVQRCTEVESGGRMVDAILTNTLLPQMSQILLSAHARDERYRRVQVSCDQGEFVCQFAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV | YP_005934532.1 | chaperone ClpB | VFG2076 | Protein | 0.0 | 60 |
| clpV | YP_005934532.1 | chaperone ClpB | VFG2084 | Protein | 4e-136 | 43 |
