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Name : fliP (PAJ_1617) Accession : YP_005934493.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliP precursor Function : - COG functional category : - COG ID : - EC number : - Position : 1943403 - 1944137 bp Length : 735 bp Strand : + Note : similar to Pantoea sp. At-9b, flagellar biosynthetic protein FliP (NCBI: ZP_05728769.1) COG: cell motility and chemotaxis subcellular localization as predicted by Psort 2.0: inner membrane DNA sequence : ATGATGCGTCGACTGCTCCCTCTTCTGCCGCTGCTGTTGCTGGCACCGGTTGCCCATGCCCAGTTGCCGGGCCTGGTTAG TCAGCCATTAGCTAACGGTGGCCAAAGCTGGTCACTGCCGGTACAAACGCTGGTCTTTATTACTTCGTTAACATTCCTGC CAGCCATTCTGTTAATGATGACCAGCTTTACCCGCATCATTATTGTTTTCGGCCTGCTACGTAATGCGCTGGGCACGCCT TCCGCGCCGCCTAACCAGGTATTACTTGGCCTGACCTTATTTTTAACGTTTTTTATTATGGCACCGACCTTCGATAAAAT TTATCAGGATGCCTACCTGCCATTTAGCCAGGATAAAATCAGCATGGATGTGGCGATCGATAAAGGCGCACAGCCGCTGC GGGAGTTTATGCTGCGGCAAACCCGTGAGGCTGACTTAGCGTTATTTGCCCGCCTGGCAAATACAGCGCCGATTGCGGGT CCGGAAGCCGTACCTATGCGTATTCTGTTGCCGGCTTACGTGACCAGTGAATTAAAAACCGCATTCCAGATTGGCTTTAC CGTATTTATTCCTTTTTTAATTATCGACCTGGTGGTTGCCAGCGTGTTAATGGCACTCGGGATGATGATGGTTCCCCCGG CAACAATTGCGCTGCCGTTCAAATTAATGTTGTTTGTTCTGGTGGACGGCTGGCAATTGCTGGTTGGCTCGCTGGCGCAA AGTTTCTATTCCTGA Protein sequence : MMRRLLPLLPLLLLAPVAHAQLPGLVSQPLANGGQSWSLPVQTLVFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTP SAPPNQVLLGLTLFLTFFIMAPTFDKIYQDAYLPFSQDKISMDVAIDKGAQPLREFMLRQTREADLALFARLANTAPIAG PEAVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLAQ SFYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 5e-23 | 43 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 5e-23 | 43 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 5e-23 | 43 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 1e-24 | 42 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 3e-26 | 42 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 6e-28 | 41 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 6e-27 | 41 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 3e-27 | 41 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 3e-27 | 41 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 2e-26 | 41 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 4e-27 | 41 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 3e-27 | 41 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-27 | 41 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 3e-27 | 41 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 4e-27 | 41 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 3e-27 | 41 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-27 | 41 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 3e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_005934493.1 | flagellar biosynthetic protein FliP precursor | VFG2338 | Protein | 1e-88 | 89 |
| fliP | YP_005934493.1 | flagellar biosynthetic protein FliP precursor | VFG2494 | Protein | 5e-68 | 67 |
| fliP | YP_005934493.1 | flagellar biosynthetic protein FliP precursor | VFG1259 | Protein | 1e-57 | 61 |
| fliP | YP_005934493.1 | flagellar biosynthetic protein FliP precursor | VFG2016 | Protein | 2e-54 | 55 |
| fliP | YP_005934493.1 | flagellar biosynthetic protein FliP precursor | VFG0188 | Protein | 2e-28 | 41 |
| fliP | YP_005934493.1 | flagellar biosynthetic protein FliP precursor | VFG0827 | Protein | 2e-27 | 41 |
